RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TWF2Q6IBS0 349 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 RSPO2Q6UXX9 243 aaPredicted RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CKAP2LQ8IYA6 745 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 COLGALT2Q8IYK4 626 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SPEM1Q8N4L4 309 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 LINC01465Q8N7H1 131 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PNPLA1Q8N8W4 532 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MDM1Q8TC05 714 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SREK1Q8WXA9 508 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 DIO2Q92813 273 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GJA10Q969M2 543 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 RSPRY1Q96DX4 576 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SCLT1Q96NL6 688 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CLSTN3Q9BQT9 956 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MXRA8Q9BRK3 442 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PAAF1Q9BRP4 392 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 FDXACB1Q9BRP7 624 aaPredicted RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 EDEM2Q9BV94 578 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 HERC2P3Q9BVR0 1158 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CXCL16Q9H2A7 254 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PSTPIP2Q9H939 334 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 AGO4Q9HCK5 861 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 FSCN3Q9NQT6 498 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF302Q9NR11 478 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 HELLSQ9NRZ9 838 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ANKFY1Q9P2R3 1169 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 APEX2Q9UBZ4 518 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PCDHA6Q9UN73 950 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MSRB2Q9Y3D2 182 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MRPS23Q9Y3D9 190 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 HES2Q9Y543 173 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PCDHA8Q9Y5H6 950 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PIAS3Q9Y6X2 628 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SPTA1P02549 2419 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 KIAA1671Q9BY89 1806 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM8BA6NDV4 472 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ANTXRLA6NF34 631 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MAN2B1O00754 1011 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 HGSO14964 777 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MEFVO15553 781 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF623O75123 536 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ECI2O75521 394 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RPP40O75818 363 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PLEKHA8P1O95397 391 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CAVIN2O95810 425 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RPLP2P05387 115 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 KRT10P13645 584 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PLA2G2AP14555 144 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RXRAP19793 462 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GDI1P31150 447 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 HOXA11P31270 313 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MPLP40238 635 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 BCL6P41182 706 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CCR2P41597 374 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MAGEA9P43362 315 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GIPRP48546 466 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SCNN1GP51170 649 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CCR3P51677 355 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MLLT6P55198 1093 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 IRX4P78413 519 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SIM1P81133 766 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CREB5Q02930 508 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 UGCGQ16739 394 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SPDYAQ5MJ70 313 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PPM1LQ5SGD2 360 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GTF2IRD2BQ6EKJ0 949 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CYP26C1Q6V0L0 522 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MTSS1LQ765P7 747 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CACNA2D4Q7Z3S7 1137 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MRPL10Q7Z7H8 261 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GTF2IRD2Q86UP8 949 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 WDR5BQ86VZ2 330 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 IQCA1Q86XH1 822 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PROSER1Q86XN7 944 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CEP57Q86XR8 500 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RNF168Q8IYW5 571 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SRBD1Q8N5C6 995 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SAMD3Q8N6K7 520 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 C19orf47Q8N9M1 422 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 LNX1Q8TBB1 728 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SLC7A14Q8TBB6 771 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 HASPINQ8TF76 798 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 KLHL6Q8WZ60 621 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CUL5Q93034 780 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GPATCH3Q96I76 525 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ZFYVE19Q96K21 471 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SPATA32Q96LK8 384 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 LRRC3BQ96PB8 259 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM193BQ96PV7 902 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GAD1Q99259 594 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SDF4Q9BRK5 362 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 TRMT61BQ9BVS5 477 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 APOL6Q9BWW8 343 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 EIF2AQ9BY44 585 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MRPL9Q9BYD2 267 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RHOBTB2Q9BYZ6 727 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PCED1AQ9H1Q7 454 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms