RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 FUT11Q495W5 492 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CCDC157Q569K6 752 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 DBX2Q6ZNG2 339 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 ZNF605Q86T29 641 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 UCMAQ8WVF2 138 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 SNX19Q92543 992 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 PRCCQ92733 491 aaPredicted RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 SIPA1Q96FS4 1042 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CRELD1Q96HD1 420 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 MRPL45Q9BRJ2 306 aaKnown RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 NUP58Q9BVL2 599 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 PCED1AQ9H1Q7 454 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 PCIF1Q9H4Z3 704 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 TMEM30AQ9NV96 361 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 COMMD8Q9NX08 183 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 GMIPQ9P107 970 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CCDC39Q9UFE4 941 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPB1-207ENST00000529866 CLIC4Q9Y696 253 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 STON1Q9Y6Q2 735 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 ANK1P16157 1881 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 KNL1Q8NG31 2342 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 KNTC1P50748 2209 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 MYO18AQ92614 2054 aaKnown RBP11.02□□□□□ -0.64
COPB1-207ENST00000529866 HELZP42694 1942 aaKnown RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 A0A1B0GVT2 93 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 FAM149AA5PLN7 773 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 CAPN8A6NHC0 703 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 CLDN5O00501 218 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 RRP8O43159 456 aaKnown RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 C1QL1O75973 258 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 ZDHHC11BP0C7U3 371 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 PLA2G2AP14555 144 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 IDEP14735 1019 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 HNF1BP35680 557 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 TXLNAP40222 546 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 TPMTP51580 245 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 WDR72Q3MJ13 1102 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 C6orf118Q5T5N4 469 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 TMPRSS12Q86WS5 348 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 MARCH9Q86YJ5 346 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 TMPRSS6Q8IU80 811 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 SCAMP5Q8TAC9 235 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 MED10Q9BTT4 135 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 B3GNT5Q9BYG0 378 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 MKRN2Q9H000 416 aaKnown RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 FBXO44Q9H4M3 255 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 TLR8Q9NR97 1041 aaKnown RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 EIF2B4Q9UI10 523 aaKnown RBP11.02□□□□□ -0.65
COPB1-207ENST00000529866 PTPRJQ12913 1337 aa11.02□□□□□ -0.65
COPB1-207ENST00000529866 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 CABIN1Q9Y6J0 2220 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 MYO18BQ8IUG5 2567 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 PTPRQQ9UMZ3 2332 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 FAM92AA1XBS5 289 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 WASH3PC4AMC7 463 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 CLSTN1O94985 981 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 IGLV3-19P01714 112 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 TNNI1P19237 187 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 CASP5P51878 434 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 CDH8P55286 799 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 BNC1Q01954 994 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 ORC1Q13415 861 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 TRPC3Q13507 836 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 PTPRNQ16849 979 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 DHRS13Q6UX07 377 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 TRAPPC11Q7Z392 1133 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 CBWD2Q8IUF1 395 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 BAP1Q92560 729 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 IGSF8Q969P0 613 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 EPSTI1Q96J88 318 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 TNIP3Q96KP6 325 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
COPB1-207ENST00000529866 IL37Q9NZH6 218 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 THAP10Q9P2Z0 257 aaPredicted RBP11.01□□□□□ -0.65
COPB1-207ENST00000529866 FTSJ1Q9UET6 329 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
COPB1-207ENST00000529866 BTBD3Q9Y2F9 522 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
COPB1-207ENST00000529866 ADAMTS9Q9P2N4 1935 aa11.01□□□□□ -0.65
COPB1-207ENST00000529866 A0A087X0B3 334 aa11□□□□□ -0.65
COPB1-207ENST00000529866 KCNJ18B7U540 433 aa11□□□□□ -0.65
COPB1-207ENST00000529866 PLK4O00444 970 aa11□□□□□ -0.65
COPB1-207ENST00000529866 PCDHGA12O60330 932 aa11□□□□□ -0.65
COPB1-207ENST00000529866 CISD3P0C7P0 127 aa11□□□□□ -0.65
COPB1-207ENST00000529866 DLATP10515 647 aaKnown RBP11□□□□□ -0.65
COPB1-207ENST00000529866 CDK4P11802 303 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms