RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 LSM3P62310 102 aaKnown RBP14.06□□□□□ -0.16
LRRK1-202ENST00000525284 HSF2Q03933 536 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 LINC00523Q86TU6 105 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 CCDC126Q96EE4 140 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 DSN1Q9H410 356 aa14.06□□□□□ -0.16
LRRK1-202ENST00000525284 NEDD4P46934 1319 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 FOXN1O15353 648 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 SPIRE1Q08AE8 756 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 MPP2Q14168 576 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 TOMM20Q15388 145 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 MRNIPQ6NTE8 343 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CROCCP3Q8IVE0 287 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 PJA1Q8NG27 643 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 KBTBD7Q8WVZ9 684 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 RFT1Q96AA3 541 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 PLEKHG4BQ96PX9 1271 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CCDC3Q9BQI4 270 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 TMEM165Q9HC07 324 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 STX16-NPEPL1H3BU86 382 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 STX16O14662 325 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CYP27B1O15528 508 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 FAM117BQ6P1L5 589 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 DHFR2Q86XF0 187 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
LRRK1-202ENST00000525284 OSCP1Q8WVF1 389 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 HARS2P49590 506 aaKnown RBP14.05□□□□□ -0.16
LRRK1-202ENST00000525284 NR6A1Q15406 480 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CYP2R1Q6VVX0 501 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 FAM92AA1XBS5 289 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CCR4P51679 360 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CACNB3P54284 484 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
LRRK1-202ENST00000525284 NT5DC4Q86YG4 428 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 CLYBLQ8N0X4 340 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 GPD1P21695 349 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 BGNP21810 368 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 FGFR3P22607 806 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 COILP38432 576 aaPredicted RBP14.05□□□□□ -0.16
LRRK1-202ENST00000525284 LIFRP42702 1097 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 STARD3Q14849 445 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 HIPK1Q86Z02 1210 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
LRRK1-202ENST00000525284 SIPA1Q96FS4 1042 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 STK33Q9BYT3 514 aa14.05□□□□□ -0.16
LRRK1-202ENST00000525284 RRN3P2A6NIE6 340 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 NOS1APO75052 506 aaPredicted RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 KATNA1O75449 491 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 LDLRP01130 860 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 CCNA2P20248 432 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 CCNG1P51959 295 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 USF2Q15853 346 aaPredicted RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 C10orf120Q5SQS8 335 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 PLA2G4FQ68DD2 849 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 TMEM179Q6ZVK1 233 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 GUF1Q8N442 669 aaKnown RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 USP7Q93009 1102 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 PFDN2Q9UHV9 154 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 USP21Q9UK80 565 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 UBDO15205 165 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 NCAM1P13591 858 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 ACADLP28330 430 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 PTPN4P29074 926 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 MAGEA2P43356 314 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 FAM9CQ8IZT9 166 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 MYCBPAPQ8TBZ2 947 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 MSH3P20585 1137 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 RBP5P82980 135 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 KYAT1Q16773 422 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 LRRC74BQ6ZQY2 392 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 MED8Q96G25 268 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 DPY30Q9C005 99 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 ATXN2Q99700 1313 aaKnown RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 CENPCQ03188 943 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 BTBD9Q96Q07 612 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 STAP2Q9UGK3 403 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 WWP2O00308 870 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 OMPP47874 163 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 BIKQ13323 160 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 NCOA4Q13772 614 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 TMEM132DQ14C87 1099 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 SUZ12Q15022 739 aaKnown RBP14.04□□□□□ -0.16
LRRK1-202ENST00000525284 CCDC36Q8IYA8 594 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 FBXO36Q8NEA4 188 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 DPF2Q92785 391 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 TBATAQ96M53 351 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 NEUROD4Q9HD90 331 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 HOXC10Q9NYD6 342 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 TBC1D24Q9ULP9 559 aa14.04□□□□□ -0.16
LRRK1-202ENST00000525284 TSPAN4O14817 238 aa14.03□□□□□ -0.16
LRRK1-202ENST00000525284 SPTLC1O15269 473 aa14.03□□□□□ -0.16
LRRK1-202ENST00000525284 ANXA9O76027 345 aa14.03□□□□□ -0.16
LRRK1-202ENST00000525284 UBOX5O94941 541 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms