RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 SNHG28P0DPA3 235 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 ADSLP30566 484 aaPredicted RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 GNALP38405 381 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 ADCY7P51828 1080 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 RCAN1P53805 252 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 TBX4P57082 545 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 ATP2C1P98194 919 aaPredicted RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 GHRHRQ02643 423 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 MGAT2Q10469 447 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 FOXL1Q12952 345 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 CCL14Q16627 93 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 MUM1L1Q5H9M0 696 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 FAM47AQ5JRC9 791 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 KLHDC10Q6PID8 442 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 USP30Q70CQ3 517 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 SESTD1Q86VW0 696 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 UNC5BQ8IZJ1 945 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 SLC17A8Q8NDX2 589 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 WDR48Q8TAF3 677 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 SNX33Q8WV41 574 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 DYNLL2Q96FJ2 89 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 GPHA2Q96T91 129 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 ENKD1Q9H0I2 346 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 A1CFQ9NQ94 594 aaKnown RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 CHST12Q9NRB3 414 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 CYP39A1Q9NYL5 469 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 PCDHA13Q9Y5I0 950 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 RBM8AQ9Y5S9 174 aaKnown RBP4.79□□□□□ -1.64
HDAC2-216ENST00000523628 LRRC37A2A6NM11 1700 aa4.79□□□□□ -1.64
HDAC2-216ENST00000523628 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 NCK2O43639 380 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 PRKAB2O43741 272 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 EIF3JO75822 258 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 AMY1AP04745 511 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ALDH2P05091 517 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ASGR1P07306 291 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 PARP1P09874 1014 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ALAS1P13196 640 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 CASTP20810 708 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 AKAP5P24588 427 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 MSX2P35548 267 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 CDK7P50613 346 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ALDH5A1P51649 535 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 NUCB1Q02818 461 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TLE2Q04725 743 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ZNF543Q08ER8 600 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TARDBPQ13148 414 aaKnown RBP eCLIP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 GTF2H3Q13889 308 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 KRT32Q14532 448 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 NOMO1Q15155 1222 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 STXBP2Q15833 593 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 MST1LQ2TV78 715 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 GJC2Q5T442 439 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 IFIT1BQ5T764 474 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 CCSAPQ6IQ19 270 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 USP45Q70EL2 814 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 NOL8Q76FK4 1167 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ADGRE4PQ86SQ3 457 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 PLA2G15Q8NCC3 412 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 FBXO18Q8NFZ0 1043 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 OR14K1Q8NGZ2 314 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 AFAP1L1Q8TED9 768 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 DIS3LQ8TF46 1054 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ATXN2LQ8WWM7 1075 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 NEU4Q8WWR8 484 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 HERVK_113Q902F9 699 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 CUL5Q93034 780 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 SLC39A13Q96H72 371 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 MTG1Q9BT17 334 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 HIPK3Q9H422 1215 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TLR9Q9NR96 1032 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 MTMR10Q9NXD2 777 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 PLA2G3Q9NZ20 509 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 FLRT1Q9NZU1 646 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 SEC63Q9UGP8 760 aaKnown RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TBX21Q9UL17 535 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ZNF215Q9UL58 517 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 ZMYND8Q9ULU4 1186 aaPredicted RBP4.78□□□□□ -1.64
HDAC2-216ENST00000523628 TNNQ9UQP3 1299 aa4.78□□□□□ -1.64
HDAC2-216ENST00000523628 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 A0A087X1B8 175 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 CCDC196A0A1B0GTZ2 297 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 PQBP1O60828 265 aaKnown RBP4.77□□□□□ -1.65
HDAC2-216ENST00000523628 PPFIA4O75335 1185 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 ALDH1A2O94788 518 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 GH1P01241 217 aa4.77□□□□□ -1.65
HDAC2-216ENST00000523628 FGAP02671 866 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms