RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.57□□□□□ -1.04
PVT1-213ENST00000522414 OBSL1O75147 1896 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
PVT1-213ENST00000522414 ACACBO00763 2458 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 C2orf78A6NCI8 922 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ANTXRLA6NF34 631 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 POLR2DO15514 142 aaKnown RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 PPP6R2O75170 966 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 TADA3O75528 432 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 TMEM191BP0C7N4 346 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CSH1P0DML2 217 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CSH2P0DML3 217 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 DLATP10515 647 aaKnown RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 HDCP19113 662 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 BDNFP23560 247 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 GJA4P35212 333 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 GNL1P36915 607 aaPredicted RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 GRIK1P39086 918 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CYP2J2P51589 502 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ZXDBP98169 803 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MYO1EQ12965 1108 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ALCAMQ13740 583 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CCDC6Q16204 474 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 TMEM196Q5HYL7 178 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 C1orf228Q6PIY5 440 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ADAMTSL4Q6UY14 1074 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 EPM2AIP1Q7L775 607 aaPredicted RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 TRAPPC11Q7Z392 1133 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 LIMS2Q7Z4I7 341 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 LONP2Q86WA8 852 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 NELFCDQ8IXH7 590 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ARL14EPQ8N8R7 260 aaPredicted RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 SCFD1Q8WVM8 642 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MSANTD3Q96H12 275 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MYO19Q96H55 970 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 FAM46AQ96IP4 442 aaKnown RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 ANKRD36BP1Q96IX9 119 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MYRFLQ96LU7 910 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MMS19Q96T76 1030 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 C7orf25Q9BPX7 421 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MRPL45Q9BRJ2 306 aaKnown RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 IER2Q9BTL4 223 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 TNMDQ9H2S6 317 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 MAGEC2Q9UBF1 373 aaPredicted RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 GMEB2Q9UKD1 530 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 R3HCC1Q9Y3T6 440 aaKnown RBP8.56□□□□□ -1.04
PVT1-213ENST00000522414 WNT6Q9Y6F9 365 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 CEP295Q9C0D2 2601 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 TCHHQ07283 1943 aa8.56□□□□□ -1.04
PVT1-213ENST00000522414 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 TRDMT1O14717 391 aaKnown RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 CUTAO60888 179 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 ABL1P00519 1130 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 TNNC2P02585 160 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 CKMP06732 381 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 RETP07949 1114 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 USP17L7P0C7H9 530 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 TNNI1P19237 187 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 DDX6P26196 483 aaKnown RBP eCLIP8.55□□□□□ -1.04
PVT1-213ENST00000522414 PCSK1P29120 753 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 AFMP43652 599 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 CASP4P49662 377 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 CACNA2D1P54289 1103 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 CDH8P55286 799 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 ASIC1P78348 528 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 AMPD3Q01432 767 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 GRSF1Q12849 480 aaKnown RBP eCLIP8.55□□□□□ -1.04
PVT1-213ENST00000522414 CUL4BQ13620 913 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 SNRNP35Q16560 246 aaKnown RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 CFAP221Q4G0U5 840 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 LAIR1Q6GTX8 287 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 CEP68Q76N32 757 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 DPH6Q7L8W6 267 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 HS2ST1Q7LGA3 356 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 GRAMD1CQ8IYS0 662 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 SYNPOQ8N3V7 929 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 IQUBQ8NA54 791 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 LEO1Q8WVC0 666 aaPredicted RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 EZH1Q92800 747 aaPredicted RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 MYLPFQ96A32 169 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 ZNF396Q96N95 335 aaPredicted RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 SYT15Q9BQS2 421 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 RNF38Q9H0F5 515 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 GZF1Q9H116 711 aaPredicted RBP8.55□□□□□ -1.04
PVT1-213ENST00000522414 ECT2Q9H8V3 914 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 SLC39A2Q9NP94 309 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 AGPAT3Q9NRZ7 376 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 SEMA4GQ9NTN9 838 aa8.55□□□□□ -1.04
PVT1-213ENST00000522414 TMEM30AQ9NV96 361 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms