RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 THAP12O43422 761 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 ADH1CP00326 375 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 TIE1P35590 1138 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 MFAP3P55082 362 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 VWA3BQ502W6 1294 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 BTBD8Q5XKL5 378 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 ZC3H14Q6PJT7 736 aaKnown RBP12.05□□□□□ -0.48
VCAN-212ENST00000515397 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 PRR23BQ6ZRT6 265 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 DENND1CQ8IV53 801 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 FMNL3Q8IVF7 1028 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 SCUBE3Q8IX30 993 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 SYNPOQ8N3V7 929 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 NELL1Q92832 810 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 PNKPQ96T60 521 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 VPS16Q9H269 839 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 NDST4Q9H3R1 872 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 ST7Q9NRC1 585 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 MARCH2Q9P0N8 246 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 CYTH4Q9UIA0 394 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 DNAJC12Q9UKB3 198 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 SLC8A2Q9UPR5 921 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 INVSQ9Y283 1065 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 NFE2L3Q9Y4A8 694 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 PCDHGA2Q9Y5H1 932 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 SPTBN4Q9H254 2564 aa12.05□□□□□ -0.48
VCAN-212ENST00000515397 TBC1D3BA6NDS4 549 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 FOXN3O00409 490 aaPredicted RBP12.04□□□□□ -0.48
VCAN-212ENST00000515397 MSI1O43347 362 aaKnown RBP12.04□□□□□ -0.48
VCAN-212ENST00000515397 TSPAN3O60637 253 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 TULP3O75386 442 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 KAT7O95251 611 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 CORO1AP31146 461 aaKnown RBP12.04□□□□□ -0.48
VCAN-212ENST00000515397 WASP42768 502 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 GPD2P43304 727 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 PSEN1P49768 467 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 KLK7P49862 253 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 DAOAP59103 153 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 GAD2Q05329 585 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 MAN2A1Q16706 1144 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 DPY19L2P1Q6NXN4 242 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 KLHDC10Q6PID8 442 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 Q6ZNB5 142 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 TOGARAM2Q6ZUX3 1019 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 USP33Q8TEY7 942 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 KCTD13Q8WZ19 329 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 FANCLQ9NW38 375 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 APEX2Q9UBZ4 518 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 TJP2Q9UDY2 1190 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
VCAN-212ENST00000515397 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
VCAN-212ENST00000515397 CNTN6Q9UQ52 1028 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
VCAN-212ENST00000515397 HELZP42694 1942 aaKnown RBP12.03□□□□□ -0.48
VCAN-212ENST00000515397 DCLK1O15075 740 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 LILRB5O75023 590 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 APODP05090 189 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 TYRP14679 529 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 HNRNPLP14866 589 aaKnown RBP eCLIP12.03□□□□□ -0.481e-9■■■■■ 31.5
VCAN-212ENST00000515397 GNA15P30679 374 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 NRLP54845 237 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 COG7P83436 770 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 GOLGA8DPQ0D2H9 430 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 DMC1Q14565 340 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 TAF5Q15542 800 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 TCP11X2Q5H9J9 407 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 SASS6Q6UVJ0 657 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 ETFBKMTQ8IXQ9 262 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 ARHGAP18Q8N392 663 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 PHTF2Q8N3S3 785 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 ALLCQ8N6M5 410 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 OTUB2Q96DC9 234 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 IER2Q9BTL4 223 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
VCAN-212ENST00000515397 PLCB1Q9NQ66 1216 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 DNAJC17Q9NVM6 304 aaKnown RBP12.03□□□□□ -0.48
VCAN-212ENST00000515397 DEC1Q9P2X7 70 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 CLEC4EQ9ULY5 219 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
VCAN-212ENST00000515397 ZNF292O60281 2723 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 MYO16Q9Y6X6 1858 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 CFAP54Q96N23 3096 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 FRYLO94915 3013 aa12.03□□□□□ -0.48
VCAN-212ENST00000515397 GOLGA6L7A0A1B0GV03 622 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms