RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	KMT5A	Q9NQR1	393 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	MARK1	Q9P0L2	795 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	DERA	Q9Y315	318 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	APC	P25054	2843 aa		11.46	□□□□□ -0.58
PTCD2-208	ENST00000510676	USP12	O75317	370 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	CISD3	P0C7P0	127 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	FAM87A	P0C7U9	286 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	ACO1	P21399	889 aa	Known RBP	11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	ELAVL4	P26378	380 aa	Known RBP	11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	ACSL1	P33121	698 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	CLN3	Q13286	438 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	PDAP1	Q13442	181 aa	Known RBP	11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	ANO4	Q32M45	955 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	JADE1	Q6IE81	842 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	BBS7	Q8IWZ6	715 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	SLC46A1	Q96NT5	459 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	CCNL2	Q96S94	520 aa	Predicted RBP	11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	EPN3	Q9H201	632 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	TJP2	Q9UDY2	1190 aa		11.45	□□□□□ -0.58
PTCD2-208	ENST00000510676	PRRC2C	Q9Y520	2896 aa	Known RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CKAP5	Q14008	2032 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	KPNA7	A9QM74	516 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	NEMF	O60524	1076 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	PPFIA2	O75334	1257 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CPA1	P15085	419 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CDC25A	P30304	524 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	RXRG	P48443	463 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	C21orf59	P57076	290 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	NOP14	P78316	857 aa	Known RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CCT2	P78371	535 aa	Known RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	MYL7	Q01449	175 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	STRN3	Q13033	797 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	MAPK7	Q13164	816 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CCDC142	Q17RM4	750 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	SGO2	Q562F6	1265 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	PRAMEF14	Q5SWL7	426 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	VSTM1	Q6UX27	236 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	DENND5B	Q6ZUT9	1274 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	ADAT2	Q7Z6V5	191 aa	Known RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	TICAM1	Q8IUC6	712 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	PDCL2	Q8N4E4	241 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	TMEM161B	Q8NDZ6	487 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	EXTL1	Q92935	676 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	KCNN1	Q92952	543 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	TNFRSF25	Q93038	417 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	DEPDC7	Q96QD5	511 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	XPO6	Q96QU8	1125 aa	Known RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	BHMT2	Q9H2M3	363 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	EHD2	Q9NZN4	543 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	GTF3C4	Q9UKN8	822 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	C2CD2	Q9Y426	696 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	PCNX1	Q96RV3	2341 aa		11.44	□□□□□ -0.58
PTCD2-208	ENST00000510676	CDRT15L2	A8MXV6	281 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	SEMA4F	O95754	770 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	IGHV4-34	P06331	123 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	MAPT	P10636	758 aa	Known RBP	11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	ACADM	P11310	421 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	TYR	P14679	529 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	ARRB1	P49407	418 aa	Predicted RBP	11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	BCAT1	P54687	386 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	TMEM132D	Q14C87	1099 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	IGFBP7	Q16270	282 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	FAM171B	Q6P995	826 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	FAM124A	Q86V42	546 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	SCN4B	Q8IWT1	228 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	SGF29	Q96ES7	293 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	ARHGAP9	Q9BRR9	750 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	SLC25A18	Q9H1K4	315 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	ERVMER34-1	Q9H9K5	563 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	WDR35	Q9P2L0	1181 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	FBXO10	Q9UK96	956 aa		11.43	□□□□□ -0.58
PTCD2-208	ENST00000510676	NIPBL	Q6KC79	2804 aa	eCLIP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	TP53BP1	Q12888	1972 aa	Predicted RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676		A0A1W2PNU3	283 aa	Predicted RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	C10orf142	B7Z368	130 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	OGT	O15294	1046 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	SLC16A4	O15374	487 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	OPA1	O60313	960 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	SYNCRIP	O60506	623 aa	Known RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	GREM1	O60565	184 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	HIP1R	O75146	1068 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	WNT1	P04628	370 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	MBL2	P11226	248 aa	Predicted RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	DGKG	P49619	791 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	SV2C	Q496J9	727 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	CLEC14A	Q86T13	490 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	ADGRF2	Q8IZF7	708 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	TMEM86A	Q8N2M4	240 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	SKA1	Q96BD8	255 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	TRIM9	Q9C026	710 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	DDX43	Q9NXZ2	648 aa	Known RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	CPSF3	Q9UKF6	684 aa	Known RBP	11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	L1RE1	Q9UN81	338 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	SLC27A6	Q9Y2P4	619 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	PCDHGA8	Q9Y5G5	932 aa		11.42	□□□□□ -0.58
PTCD2-208	ENST00000510676	NEDD8-MDP1	E9PL57	170 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms