RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 FAM124AQ86V42 546 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 NSUN7Q8NE18 718 aaKnown RBP12.42□□□□□ -0.42
ATG3-209ENST00000496423 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
ATG3-209ENST00000496423 TSC1Q92574 1164 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 TNFRSF25Q93038 417 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 NACA2Q9H009 215 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 KCNK4Q9NYG8 393 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
ATG3-209ENST00000496423 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 A0A0B4J269 797 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 E9PMD0 336 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 TRIM24O15164 1050 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 VILLO15195 856 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 SUV39H1O43463 412 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 CR2P20023 1033 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 BDNFP23560 247 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 LSSP48449 732 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 RACK1P63244 317 aaKnown RBP12.41□□□□□ -0.42
ATG3-209ENST00000496423 GABREP78334 506 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 ASIC1P78348 528 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 TAF10Q12962 218 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 HECTD3Q5T447 861 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 KRT79Q5XKE5 535 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 FAM171BQ6P995 826 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 SNX29Q8TEQ0 813 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 OVCA2Q8WZ82 227 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 COL12A1Q99715 3063 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 BTBD1Q9H0C5 482 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 C6orf106Q9H6K1 298 aaPredicted RBP12.41□□□□□ -0.42
ATG3-209ENST00000496423 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
ATG3-209ENST00000496423 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
ATG3-209ENST00000496423 CBX4O00257 560 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 FAM189A1O60320 539 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 FSBPO95073 299 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 IL18RAPO95256 599 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 SEMA4FO95754 770 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 KRT10P13645 584 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 RBMS1P29558 406 aaKnown RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 FOSBP53539 338 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 USP46P62068 366 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 INSM1Q01101 510 aaPredicted RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 CYP27A1Q02318 531 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 ARID5AQ03989 594 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 MAPK7Q13164 816 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 ECM1Q16610 540 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 OXR1Q8N573 874 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 TOP6BLQ8N6T0 577 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 BIRC7Q96CA5 298 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 DEPDC7Q96QD5 511 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 PKMYT1Q99640 499 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 POLR1BQ9H9Y6 1135 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 GDF3Q9NR23 364 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
ATG3-209ENST00000496423 KCND2Q9NZV8 630 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 CDH9Q9ULB4 789 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
ATG3-209ENST00000496423 KNL1Q8NG31 2342 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 TSPAN3O60637 253 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 PIGRP01833 764 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 MPOP05164 745 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 ACP1P24666 158 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 YWHAQP27348 245 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 ACOT2P49753 483 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 NCKAP1LP55160 1127 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 RAD51AP2Q09MP3 1159 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 SFSWAPQ12872 951 aaKnown RBP12.39□□□□□ -0.43
ATG3-209ENST00000496423 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
ATG3-209ENST00000496423 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 DIEXFQ68CQ4 756 aaKnown RBP12.39□□□□□ -0.43
ATG3-209ENST00000496423 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 TPGS1Q6ZTW0 290 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 C8orf48Q96LL4 319 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 SYT15Q9BQS2 421 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 RUSC1Q9BVN2 902 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 STARD5Q9NSY2 213 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 THAP10Q9P2Z0 257 aaPredicted RBP12.39□□□□□ -0.43
ATG3-209ENST00000496423 SNX9Q9Y5X1 595 aa12.39□□□□□ -0.43
ATG3-209ENST00000496423 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
ATG3-209ENST00000496423 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 COCHO43405 550 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 USP12O75317 370 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 EPHX1P07099 455 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms