RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 INVSQ9Y283 1065 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 CKAP5Q14008 2032 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-212ENST00000493940 KAT7O95251 611 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 AFPP02771 609 aaKnown RBP13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 YWHAGP61981 247 aaKnown RBP eCLIP13.24□□□□□ -0.29
HSPG2-212ENST00000493940 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 ADIGQ0VDE8 80 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 EFEMP1Q12805 493 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CCDC6Q16204 474 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 FBXO43Q4G163 708 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 KLHDC10Q6PID8 442 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 LCLAT1Q6UWP7 414 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 TTC39CQ8N584 583 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 ALLCQ8N6M5 410 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 SLC35F5Q8WV83 523 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 EDEM1Q92611 657 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 BHMTQ93088 406 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 OTUB2Q96DC9 234 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 NACA2Q9H009 215 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-212ENST00000493940 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 PLK2Q9NYY3 685 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 NCDNQ9UBB6 729 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CYTH4Q9UIA0 394 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 RASAL2Q9UJF2 1139 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CLEC4EQ9ULY5 219 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
HSPG2-212ENST00000493940 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
HSPG2-212ENST00000493940 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 BECN2A8MW95 431 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 PRRT4C9JH25 899 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 P4HA2O15460 535 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ATG13O75143 517 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 KLF8O95600 359 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ZBED1O96006 694 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ADH1CP00326 375 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 PAEPP09466 180 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 LCP1P13796 627 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 GAD2Q05329 585 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 CNGA2Q16280 664 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ANO4Q32M45 955 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 HSP90AA4PQ58FG1 418 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 CLEC17AQ6ZS10 378 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 RBBP8NLQ8NC74 664 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ERLEC1Q96DZ1 483 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 CNOT6LQ96LI5 555 aaKnown RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 ACOX2Q99424 681 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 TPSD1Q9BZJ3 242 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 SFMBT1Q9UHJ3 866 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
HSPG2-212ENST00000493940 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
HSPG2-212ENST00000493940 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 AXIN1O15169 862 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 APODP05090 189 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 FYNP06241 537 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 TYRP14679 529 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 EIF2DP41214 584 aaKnown RBP13.22□□□□□ -0.29
HSPG2-212ENST00000493940 GRIA2P42262 883 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 WASP42768 502 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 BCAT1P54687 386 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 DAOAP59103 153 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 GCNT1Q02742 428 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 CRY1Q16526 586 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 DENND1BQ6P3S1 775 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 CAMKK1Q8N5S9 505 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 TXNDC5Q8NBS9 432 aaKnown RBP13.22□□□□□ -0.29
HSPG2-212ENST00000493940 GPT2Q8TD30 523 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 GAB3Q8WWW8 586 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 KCTD13Q8WZ19 329 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 BBS2Q9BXC9 721 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 SMOC1Q9H4F8 434 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 FBXO10Q9UK96 956 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
HSPG2-212ENST00000493940 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.22□□□□□ -0.29
HSPG2-212ENST00000493940 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
HSPG2-212ENST00000493940 CCDC163A0A0D9SF12 145 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 SLC12A8A0AV02 714 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 WASH3PC4AMC7 463 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 CACNG3O60359 315 aa13.21□□□□□ -0.29
HSPG2-212ENST00000493940 GDF9O60383 454 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms