RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ITPRIPL2Q3MIP1 535 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 KLHDC7AQ5VTJ3 777 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 DENND1BQ6P3S1 775 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 SCD5Q86SK9 330 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 MIB1Q86YT6 1006 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 PASD1Q8IV76 773 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 DHX40Q8IX18 779 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ARHGAP18Q8N392 663 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF606Q8WXB4 792 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM3CQ92520 227 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 SHC3Q92529 594 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ATP2A3Q93084 1043 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 BPIFA3Q9BQP9 254 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 MIS12Q9H081 205 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 C8orf33Q9H7E9 229 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 NMUR1Q9HB89 426 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 NLRC4Q9NPP4 1024 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 OSER1Q9NX31 292 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 RASAL2Q9UJF2 1139 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 CNTN6Q9UQ52 1028 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 HELZP42694 1942 aaKnown RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ASPMQ8IZT6 3477 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 LGALS16A8MUM7 142 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 SPECC1L-ADORA2AF8WAN1 911 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 GOLGA6L19H0YKK7 550 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 ARNTLO00327 626 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 HRO43593 1189 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 LRP3O75074 770 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 OLFM2O95897 454 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 RETP07949 1114 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 HMBSP08397 361 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZDHHC11BP0C7U3 371 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 HOXB3P14651 431 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 UCHL3P15374 230 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF18P17022 549 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 KRT9P35527 623 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 PLA2G4AP47712 749 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 PSEN1P49768 467 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 TUBP50607 506 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 POLR2FP61218 127 aaKnown RBP10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 EFEMP1Q12805 493 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 NR1H3Q13133 447 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 COL9A2Q14055 689 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZSCAN23Q3MJ62 389 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 FILIP1LQ4L180 1135 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 PKDCCQ504Y2 493 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 RAB41Q5JT25 222 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 SNX30Q5VWJ9 437 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 BTBD8Q5XKL5 378 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 PMF1Q6P1K2 205 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 TADA2BQ86TJ2 420 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 RNF139Q8WU17 664 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 OSCP1Q8WVF1 389 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 LINC00597Q9H2U6 94 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 HPS4Q9NQG7 708 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 SEMA4GQ9NTN9 838 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 STRIP2Q9ULQ0 834 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 USP3Q9Y6I4 520 aa10.92□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM170AA1A519 330 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SLC9A3R1O14745 358 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 NFATC1O95644 943 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SERPINC1P01008 464 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CTHP32929 405 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 BPIFB4P59827 614 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SHC2P98077 582 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZXDBP98169 803 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 AMPD2Q01433 879 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 PON2Q15165 354 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CSRP2Q16527 193 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 N4BP2L1Q5TBK1 243 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 TAF3Q5VWG9 929 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 LAIR1Q6GTX8 287 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 LUZP1Q86V48 1076 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 RALGPS2Q86X27 583 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SLC35F5Q8WV83 523 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 KCTD13Q8WZ19 329 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 EDEM1Q92611 657 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CDK5RAP1Q96SZ6 601 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM83CQ9BQN1 747 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 FUCA2Q9BTY2 467 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 HSD3B7Q9H2F3 369 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CHRDQ9H2X0 955 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 ECT2Q9H8V3 914 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CBX8Q9HC52 389 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 PLCB1Q9NQ66 1216 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CLIC5Q9NZA1 410 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 LSM7Q9UK45 103 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 CEP83Q9Y592 693 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 FRYQ5TBA9 3013 aa10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 KIF26AQ9ULI4 1882 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-222ENST00000493792 SLC12A8A0AV02 714 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms