RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SCN1AP35498 2009 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 NOTCH4Q99466 2003 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 A0A087X0T9 212 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 ANO9A1A5B4 782 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 OR6C75A6NL08 312 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 DDX3XO00571 662 aaKnown RBP eCLIP8□□□□□ -1.13
CLDN1-202ENST00000490800 TNFRSF10BO14763 440 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 CYP26A1O43174 497 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 KRT19P08727 400 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 CCDC172P0C7W6 258 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 FAM228BP0C875 321 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 TYMPP19971 482 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 FCARP24071 287 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 TBXAS1P24557 533 aaPredicted RBP8□□□□□ -1.13
CLDN1-202ENST00000490800 ATICP31939 592 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 USP8P40818 1118 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 VIPR2P41587 438 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 ASPAP45381 313 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
CLDN1-202ENST00000490800 KRT83P78385 493 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 RBP5P82980 135 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 CYP27A1Q02318 531 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 GFPT1Q06210 699 aaPredicted RBP8□□□□□ -1.13
CLDN1-202ENST00000490800 TEAD2Q15562 447 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 SLC18A3Q16572 532 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 SLC30A5Q8TAD4 765 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 SLC20A1Q8WUM9 679 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 SMARCD2Q92925 531 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 JAKMIP2Q96AA8 810 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 ASB16Q96NS5 453 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8□□□□□ -1.13
CLDN1-202ENST00000490800 TRMT61BQ9BVS5 477 aaKnown RBP8□□□□□ -1.13
CLDN1-202ENST00000490800 LRRC3Q9BY71 257 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 BCO2Q9BYV7 579 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 BRD9Q9H8M2 597 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 LTB4R2Q9NPC1 389 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 ASAH2Q9NR71 780 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 HEBP1Q9NRV9 189 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 AGAP1Q9UPQ3 857 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 CNTN6Q9UQ52 1028 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 YIPF1Q9Y548 306 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 PCDHB4Q9Y5E5 795 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 PCDHA13Q9Y5I0 950 aa8□□□□□ -1.13
CLDN1-202ENST00000490800 MTMR11A4FU01 709 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 GOLGA6L9A6NEM1 432 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SHISA7A6NL88 538 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 CYB561D2O14569 222 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SOAT2O75908 522 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 CLSTN1O94985 981 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 CALCAP01258 141 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SP9P0CG40 484 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ODC1P11926 461 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 KRT5P13647 590 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 CHRNB2P17787 502 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 PSMC3P17980 439 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 PAX3P23760 479 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 GDI1P31150 447 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 MAGEA1P43355 309 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ALDH1A3P47895 512 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 VAV2P52735 878 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ZNF132P52740 706 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 EPHB3P54753 998 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 EPHA5P54756 1037 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 FZD5Q13467 585 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SPA17Q15506 151 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ZNF667Q5HYK9 610 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 VITQ6UXI7 678 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SCARA5Q6ZMJ2 495 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ZNF662Q6ZS27 426 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 TPRG1Q6ZUI0 275 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 DNAJB7Q7Z6W7 309 aaPredicted RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 NOP9Q86U38 636 aaKnown RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SLC47A2Q86VL8 602 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 MAML2Q8IZL2 1156 aaPredicted RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 LEMD2Q8NC56 503 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 OR10T2Q8NGX3 314 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ZSCAN18Q8TBC5 510 aaPredicted RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 IRF7Q92985 503 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 MYO19Q96H55 970 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 HPDLQ96IR7 371 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 FAXDC2Q96IV6 333 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 NELL2Q99435 816 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 AGPAT1Q99943 283 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 OSBPL6Q9BZF3 934 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 LACRTQ9GZZ8 138 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SDCBP2Q9H190 292 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SLITRK6Q9H5Y7 841 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ZNF334Q9HCZ1 680 aaPredicted RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ACP6Q9NPH0 428 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 SPATA6Q9NWH7 488 aaPredicted RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 NXF1Q9UBU9 619 aaKnown RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 NOCTQ9UK39 431 aaKnown RBP7.99□□□□□ -1.13
CLDN1-202ENST00000490800 TFR2Q9UP52 801 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 VPS13AQ96RL7 3174 aa7.99□□□□□ -1.13
CLDN1-202ENST00000490800 COL4A3Q01955 1670 aa7.98□□□□□ -1.13
CLDN1-202ENST00000490800 HEPACAM2A8MVW5 462 aa7.98□□□□□ -1.13
CLDN1-202ENST00000490800 KPNA7A9QM74 516 aa7.98□□□□□ -1.13
CLDN1-202ENST00000490800 NCAM2O15394 837 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms