RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 BTBD1Q9H0C5 482 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ABCG4Q9H172 646 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 C17orf75Q9HAS0 396 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ASCL3Q9NQ33 180 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 AASDHPPTQ9NRN7 309 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 DPP3Q9NY33 737 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-233ENST00000489352 DERAQ9Y315 318 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 BSNQ9UPA5 3926 aa12.27□□□□□ -0.45
HDAC6-233ENST00000489352 ARID1BQ8NFD5 2236 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-233ENST00000489352 SETD2Q9BYW2 2564 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CLEC18AA5D8T8 446 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 OGTO15294 1046 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 TRAK2O60296 914 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CACNG3O60359 315 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CSO75390 466 aaKnown RBP12.26□□□□□ -0.45
HDAC6-233ENST00000489352 OLFM2O95897 454 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
HDAC6-233ENST00000489352 IRF1P10914 325 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 PCSK1P29120 753 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 MAGEA11P43364 429 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 LIG4P49917 911 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 NCAPHQ15003 741 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 C3orf38Q5JPI3 329 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 HAUS3Q68CZ6 603 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CLEC18BQ6UXF7 455 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CLEC18CQ8NCF0 446 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 SGF29Q96ES7 293 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CEP295NLQ96MC4 621 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 TRIM9Q9C026 710 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 SLC25A18Q9H1K4 315 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.451e-15■■■■■ 67.3
HDAC6-233ENST00000489352 PTPRJQ12913 1337 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 CKAP5Q14008 2032 aa12.26□□□□□ -0.45
HDAC6-233ENST00000489352 TSPAN3O60637 253 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 EPHX1P07099 455 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 MUTP22033 750 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 EPHA8P29322 1005 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-233ENST00000489352 CCT6AP40227 531 aaKnown RBP12.25□□□□□ -0.45
HDAC6-233ENST00000489352 PNPLA4P41247 253 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 USP46P62068 366 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 FOXK1P85037 733 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 ARID5AQ03989 594 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 IFRD2Q12894 506 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-233ENST00000489352 EARS2Q5JPH6 523 aaKnown RBP12.25□□□□□ -0.45
HDAC6-233ENST00000489352 VSTM1Q6UX27 236 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 CCDC83Q8IWF9 413 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 TMEM86AQ8N2M4 240 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 HPS3Q969F9 1004 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
HDAC6-233ENST00000489352 LHX5Q9H2C1 402 aa12.25□□□□□ -0.45
HDAC6-233ENST00000489352 CRYBG3Q68DQ2 2970 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 SFI1A8K8P3 1242 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 POU3F2P20265 443 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-233ENST00000489352 KRT2P35908 639 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 LHX1P48742 406 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 COPAP53621 1224 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 CYP27A1Q02318 531 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 TAF10Q12962 218 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 BNIP3Q12983 259 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 SLC45A4Q5BKX6 768 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 FOXR1Q6PIV2 292 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 PTRH1Q86Y79 214 aaKnown RBP12.24□□□□□ -0.45
HDAC6-233ENST00000489352 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 OXR1Q8N573 874 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 SLC46A1Q96NT5 459 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 EPN3Q9H201 632 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 SATB2Q9UPW6 733 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
HDAC6-233ENST00000489352 CELSR2Q9HCU4 2923 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 FAM47DPA6NHR8 397 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
HDAC6-233ENST00000489352 CYP26A1O43174 497 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 OPA1O60313 960 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 ADRB2P07550 413 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 BDNFP23560 247 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 CD38P28907 300 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 CLN3Q13286 438 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 SHBQ15464 509 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 MAPRE1Q15691 268 aaKnown RBP12.23□□□□□ -0.45
HDAC6-233ENST00000489352 HECTD3Q5T447 861 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 ZSCAN1Q8NBB4 408 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 BHMTQ93088 406 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 NTPCRQ9BSD7 190 aaKnown RBP12.23□□□□□ -0.45
HDAC6-233ENST00000489352 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 TTLL2Q9BWV7 592 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 OSBPL2Q9H1P3 480 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 ASB7Q9H672 318 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 SGK2Q9HBY8 427 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 THAP10Q9P2Z0 257 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-233ENST00000489352 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 NCKAP1Q9Y2A7 1128 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
HDAC6-233ENST00000489352 TDRD6O60522 2096 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms