RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 HAPLN3Q96S86 360 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 PAIP2Q9BPZ3 127 aaKnown RBP4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 IDI2Q9BXS1 227 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 TRIM55Q9BYV6 548 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 ASCC2Q9H1I8 757 aaPredicted RBP4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 VCX3BQ9H321 246 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 EPB41L1Q9H4G0 881 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 LIN7BQ9HAP6 207 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 KCNK13Q9HB14 408 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 PIDD1Q9HB75 910 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 MRPL47Q9HD33 250 aaKnown RBP4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 VCX3AQ9NNX9 186 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 NPHS2Q9NP85 383 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 ARL8BQ9NVJ2 186 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 RAB20Q9NX57 234 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 MKS1Q9NXB0 559 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 STK32BQ9NY57 414 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 POLLQ9UGP5 575 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 PLA2G4CQ9UP65 541 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 EXOC7Q9UPT5 735 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 CNTN6Q9UQ52 1028 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 EFR3BQ9Y2G0 817 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 PCDHB2Q9Y5E7 798 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 COMMD3-BMI1R4GMX3 469 aa4.9□□□□□ -1.63
SMARCC1-206ENST00000485737 hCG_1818297A0A087WSY0 165 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SMIM31A0A1B0GVY4 71 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 A0A1W2PPM1 405 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 DENND3A2RUS2 1198 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 POC1B-GALNT4F8VUJ3 575 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 IPO5O00410 1097 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SOX1O00570 391 aaPredicted RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 FCHO1O14526 889 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 DHX15O43143 795 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 BUD23O43709 281 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 PLA2G6O60733 806 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 FKBP6O75344 327 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SPAG6O75602 509 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 TM7SF2O76062 418 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 KRT1P04264 644 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 P4HBP07237 508 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 KRT4P19013 534 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ACO1P21399 889 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 GARTP22102 1010 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SERPINB3P29508 390 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 HOXA13P31271 388 aaPredicted RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ABCD1P33897 745 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 CCNFP41002 786 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SSR1P43307 286 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 RARRES1P49788 294 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ARSEP51690 589 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ZNF132P52740 706 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ARFIP2P53365 341 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ARL4CP56559 192 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 RTP1P59025 263 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ACTR3P61158 418 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 DSG1Q02413 1049 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 GSTM4Q03013 218 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 CYP24A1Q07973 514 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ADCY1Q08828 1119 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 NFIAQ12857 509 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 GPS1Q13098 491 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 LSAMPQ13449 338 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 MAMLD1Q13495 774 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 LAMB3Q13751 1172 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 TAZQ16635 292 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 CNPY1Q3B7I2 92 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 USH1GQ495M9 461 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 PABPC1LQ4VXU2 614 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 FDX2Q6P4F2 183 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 AAGABQ6PD74 315 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SPOCD1Q6ZMY3 1216 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 RINLQ6ZS11 566 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 Q6ZS46 218 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SH2D5Q6ZV89 423 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 MARK2Q7KZI7 788 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 GSTA5Q7RTV2 222 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 HAUS6Q7Z4H7 955 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 POLNQ7Z5Q5 900 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 TRIM42Q8IWZ5 723 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 PPIL6Q8IXY8 311 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 ZBED8Q8IZ13 594 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 VPS52Q8N1B4 723 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 UBR7Q8N806 425 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 NIPA2Q8N8Q9 360 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 NAT8LQ8N9F0 302 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 TMEM161BQ8NDZ6 487 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 B4GALNT2Q8NHY0 566 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 FAM81AQ8TBF8 368 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 CCDC110Q8TBZ0 833 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 WDR60Q8WVS4 1066 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 EZH1Q92800 747 aaPredicted RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 PPP2R3CQ969Q6 453 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 OXNAD1Q96HP4 312 aaPredicted RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 PAFAH2Q99487 392 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 SIKE1Q9BRV8 207 aa4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 WDR83Q9BRX9 315 aaKnown RBP4.89□□□□□ -1.63
SMARCC1-206ENST00000485737 CENPKQ9BS16 269 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms