RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 AP4E1Q9UPM8 1137 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 ZNF148Q9UQR1 794 aa14.63□□□□□ -0.07
CLK3-204ENST00000483723 SF3B1O75533 1304 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLK3-204ENST00000483723 COL4A6Q14031 1691 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 ABHD14A-ACY1A0A1B0GW23 586 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 M0QYT0 321 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 SYF2O95926 243 aaKnown RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 OR4Q2P0C623 313 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 AIF1P55008 147 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 CAV1Q03135 178 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 NOMO1Q15155 1222 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 UAP1Q16222 522 aaPredicted RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 SLC39A12Q504Y0 691 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 ZNF365Q70YC5 407 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 PLD5Q8N7P1 536 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 BBOF1Q8ND07 529 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 NTAN1Q96AB6 310 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 ABHD8Q96I13 439 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 C8orf48Q96LL4 319 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 OXCT2Q9BYC2 517 aaPredicted RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 CWH43Q9H720 699 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 WDR6Q9NNW5 1121 aaKnown RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 MED4Q9NPJ6 270 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 RCOR3Q9P2K3 495 aaPredicted RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 SAE1Q9UBE0 346 aaPredicted RBP14.62□□□□□ -0.07
CLK3-204ENST00000483723 ASIC3Q9UHC3 531 aa14.62□□□□□ -0.07
CLK3-204ENST00000483723 H3BQF6 201 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 KIAA0355O15063 1070 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 TIMP1P01033 207 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 PECAM1P16284 738 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 TGM2P21980 687 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 BCAR1P56945 870 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 DYNLT1P63172 113 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 DEUP1Q05D60 604 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 EIF4EBP2Q13542 120 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 CTXN3Q4LDR2 81 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 BSPRYQ5W0U4 402 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 ZNF280DQ6N043 979 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 RNF168Q8IYW5 571 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 TOP1MTQ969P6 601 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 HAUS1Q96CS2 278 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 KCTD15Q96SI1 283 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 SH3GL2Q99962 352 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 TRIM62Q9BVG3 475 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 MAGEB5Q9BZ81 275 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 IL37Q9NZH6 218 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 MTRF1LQ9UGC7 380 aaKnown RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 GOLGA6BA6NDN3 693 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 H7C4K7 107 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 CAPN9O14815 690 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 F9P00740 461 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 ATF2P15336 505 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 HSD17B3P37058 310 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 GGCXP38435 758 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 GRIK1P39086 918 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 ADCY8P40145 1251 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 DHX9Q08211 1270 aaKnown RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 SCAPQ12770 1279 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 CALCOCO2Q13137 446 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 GPR17Q13304 367 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 MTMR3Q13615 1198 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 CFAP58Q5T655 872 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 FAM131BQ86XD5 332 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 GLIS1Q8NBF1 620 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 BCL7CQ8WUZ0 217 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 ZNF689Q96CS4 500 aaPredicted RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 ZIM3Q96PE6 472 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
CLK3-204ENST00000483723 PCDH9Q9HC56 1237 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 PIGVQ9NUD9 493 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 PCDHB5Q9Y5E4 795 aa14.61□□□□□ -0.07
CLK3-204ENST00000483723 H0YGN5 161 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 APOL1O14791 398 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 IGLV3-25P01717 112 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 NCAM1P13591 858 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 ZFXP17010 805 aaPredicted RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 OAS2P29728 719 aaKnown RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 ADRA1BP35368 520 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 SLC5A3P53794 718 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 EIF3EP60228 445 aaKnown RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 SMARCB1Q12824 385 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 TRIP13Q15645 432 aaPredicted RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 GSTA5Q7RTV2 222 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 CEP57Q86XR8 500 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 P3H4Q92791 437 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 TMEM121Q9BTD3 319 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 ADAM7Q9H2U9 754 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 CWC15Q9P013 229 aaKnown RBP14.6□□□□□ -0.07
CLK3-204ENST00000483723 FBXW11Q9UKB1 542 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 NFS1Q9Y697 457 aa14.6□□□□□ -0.07
CLK3-204ENST00000483723 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 NT5C1B-RDH14C9J2C7 533 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 TRIM66O15016 1216 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 RBP3P10745 1247 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 ITGB8P26012 769 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms