RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 FAM111AQ96PZ2 611 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 CENPFP49454 3210 aa12.87□□□□□ -0.35
CCDC78-213ENST00000482878 SPATA31C2B4DYI2 1134 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 CLPTM1O96005 669 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 MT-ND3P03897 115 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 KRT3P12035 628 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 BGNP21810 368 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ETV4P43268 484 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PDK3Q15120 406 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 TTC17Q96AE7 1141 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 DLDP09622 509 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 DHRS4L1P0CG22 281 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ELK3P41970 407 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 MTTPP55157 894 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PTK7Q13308 1070 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ACAP1Q15027 740 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 TRIP10Q15642 601 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 TSHZ1Q6ZSZ6 1077 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 EFR3BQ9Y2G0 817 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 MAFBQ9Y5Q3 323 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 FAM189A1O60320 539 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 ATG7O95352 703 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PPIDQ08752 370 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 CAPSQ13938 189 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 CCDC124Q96CT7 223 aaKnown RBP12.86□□□□□ -0.35
CCDC78-213ENST00000482878 CORO1BQ9BR76 489 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 PCDHGC3Q9UN70 934 aa12.86□□□□□ -0.35
CCDC78-213ENST00000482878 FCHO1O14526 889 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 TRPA1O75762 1119 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CDK4P11802 303 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 EPHB1P54762 984 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CDK16Q00536 496 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 DLG1Q12959 904 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 TAZQ16635 292 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CCDC80Q76M96 950 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 RAB3IL1Q8TBN0 382 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KCNN1Q92952 543 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 GGA3Q9NZ52 723 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 RGS17Q9UGC6 210 aaPredicted RBP12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KBTBD13C9JR72 458 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 E5RJQ4 531 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 AVILO75366 819 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KRT7P08729 469 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 AQP4P55087 323 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 FSTL1Q12841 308 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 DPYSL3Q14195 570 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 SFT2D3Q587I9 215 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 RFX6Q8HWS3 928 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 ATP9BO43861 1147 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 RBP3P10745 1247 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CRABP2P29373 138 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 CHN2P52757 468 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
CCDC78-213ENST00000482878 TRMT5Q32P41 509 aaKnown RBP12.85□□□□□ -0.35
CCDC78-213ENST00000482878 NPNTQ6UXI9 565 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 HSPH1Q92598 858 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
CCDC78-213ENST00000482878 ARID2Q68CP9 1835 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 IQANK1A0A1B0GTG1 560 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 FAM237BA0A1B0GVD1 139 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 FAM155BO75949 473 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 SRGAP2CP0DJJ0 459 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 MYL2P10916 166 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 UQCRBP14927 111 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 CD19P15391 556 aa12.84□□□□□ -0.35
CCDC78-213ENST00000482878 VCLP18206 1134 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms