RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PXNP49023 591 aaPredicted RBP17.36■□□□□ 0.37
VAMP4-204ENST00000482519 COG7P83436 770 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 CT47A1Q5JQC4 288 aaPredicted RBP17.36■□□□□ 0.37
VAMP4-204ENST00000482519 ZBTB44Q8NCP5 570 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 RNF139Q8WU17 664 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 SLC35F5Q8WV83 523 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 NELL1Q92832 810 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 FAM81BQ96LP2 452 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 ACP6Q9NPH0 428 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 ST7Q9NRC1 585 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 CNTN6Q9UQ52 1028 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
VAMP4-204ENST00000482519 RIF1Q5UIP0 2472 aaKnown RBP17.35■□□□□ 0.37
VAMP4-204ENST00000482519 GTPBP10A4D1E9 387 aaKnown RBP17.35■□□□□ 0.37
VAMP4-204ENST00000482519 NEDD8-MDP1E9PL57 170 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 K7ESF4 209 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 MED7O43513 233 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 GREM1O60565 184 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 STC2O76061 302 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 KAT7O95251 611 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 MBD3O95983 291 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 APODP05090 189 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 GNA15P30679 374 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 BSPRYQ5W0U4 402 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 DENND1BQ6P3S1 775 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 SFTPA1Q8IWL2 248 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 ZNF276Q8N554 614 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 BHMTQ93088 406 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 BBS2Q9BXC9 721 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 MIS12Q9H081 205 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 CNGB3Q9NQW8 809 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 ARHGEF4Q9NR80 690 aa17.35■□□□□ 0.37
VAMP4-204ENST00000482519 ANTXRLA6NF34 631 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.34■□□□□ 0.37
VAMP4-204ENST00000482519 K7EQS6 105 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 GABBR2O75899 941 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
VAMP4-204ENST00000482519 CORO1AP31146 461 aaKnown RBP17.34■□□□□ 0.37
VAMP4-204ENST00000482519 DAOAP59103 153 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 MESP2Q0VG99 397 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 TCP11X2Q5H9J9 407 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 MIIPQ5JXC2 388 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 BHLHA9Q7RTU4 235 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 DENND1CQ8IV53 801 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 FMNL3Q8IVF7 1028 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 CCDC26Q8TAB7 109 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 CLEC4CQ8WTT0 213 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 ZNF606Q8WXB4 792 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 GOLGA1Q92805 767 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 OLA1Q9NTK5 396 aaKnown RBP17.34■□□□□ 0.37
VAMP4-204ENST00000482519 TAB2Q9NYJ8 693 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 DEC1Q9P2X7 70 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 SFMBT1Q9UHJ3 866 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 DNAJC12Q9UKB3 198 aa17.34■□□□□ 0.37
VAMP4-204ENST00000482519 TBC1D3BA6NDS4 549 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 BECN2A8MW95 431 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 LILRB5O75023 590 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 TULP3O75386 442 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 KLKB1P03952 638 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 TYRP14679 529 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 EEF1GP26641 437 aaKnown RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 GRIA2P42262 883 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 LPAL2Q16609 132 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 PRR23BQ6ZRT6 265 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 LONP2Q86WA8 852 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 SCUBE3Q8IX30 993 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 CCDC33Q8N5R6 958 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 ENOX1Q8TC92 643 aaKnown RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 ACDQ96AP0 544 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 HSFY1Q96LI6 401 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 HHIPQ96QV1 700 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 SIX2Q9NPC8 291 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 ABCC13Q9NSE7 274 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 DNAJC17Q9NVM6 304 aaKnown RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 ANO10Q9NW15 660 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 WDR35Q9P2L0 1181 aa17.33■□□□□ 0.36
VAMP4-204ENST00000482519 AJAP1Q9UKB5 411 aaPredicted RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 PTPRZ1P23471 2315 aaPredicted RBP17.33■□□□□ 0.36
VAMP4-204ENST00000482519 TIE1P35590 1138 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 EIF2DP41214 584 aaKnown RBP17.32■□□□□ 0.36
VAMP4-204ENST00000482519 GPD2P43304 727 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
VAMP4-204ENST00000482519 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 DMC1Q14565 340 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 STX1AQ16623 288 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 EMC10Q5UCC4 262 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 Q6ZNB5 142 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 C11orf57Q6ZUT1 292 aaPredicted RBP17.32■□□□□ 0.36
VAMP4-204ENST00000482519 SYT13Q7L8C5 426 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 USP33Q8TEY7 942 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 IRGQQ8WZA9 623 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 SHC3Q92529 594 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 XPO6Q96QU8 1125 aaKnown RBP17.32■□□□□ 0.36
VAMP4-204ENST00000482519 DCLK3Q9C098 648 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 VPS16Q9H269 839 aa17.32■□□□□ 0.36
VAMP4-204ENST00000482519 ZDHHC4Q9NPG8 344 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms