RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RSRC1Q96IZ7 334 aaKnown RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 LRIG1Q96JA1 1093 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 OR14A2Q96R54 314 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 TREX2Q9BQ50 279 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 NUDT22Q9BRQ3 303 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 DPCDQ9BVM2 203 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 AP1M1Q9BXS5 423 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 LMAN2LQ9H0V9 348 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 RNPEPQ9H4A4 650 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 PLEKHA2Q9HB19 425 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 ANKEF1Q9NU02 776 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 NSMCE4AQ9NXX6 385 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 VPS28Q9UK41 221 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 OAZ3Q9UMX2 235 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 NOL7Q9UMY1 257 aaKnown RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 SLC27A6Q9Y2P4 619 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 USP15Q9Y4E8 981 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 KCTD3Q9Y597 815 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 PCDHB7Q9Y5E2 793 aa4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 THOC2Q8NI27 1593 aaKnown RBP4.13□□□□□ -1.75
HMGB1P25-201ENST00000468402 CLIP1P30622 1438 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 CHD1O14646 1710 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 ARAP1Q96P48 1450 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3DA0A087WVF3 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3IA0A087WXS9 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3EA0A087X179 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3KA0A087X1G2 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 CCDC78A2IDD5 438 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3BA6NDS4 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3FA6NER0 549 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 OR2W5A6NFC9 320 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3LB9A6J9 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 MATN2O00339 956 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TRIAP1O43715 76 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 AHCYL1O43865 530 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GUCY1B2O75343 617 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3HP0C7X1 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 KCNA2P16389 499 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GCSHP23434 173 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 THBS4P35443 961 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 HOXD12P35452 270 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 COPB2P35606 906 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 ACTN2P35609 894 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 PSMC2P35998 433 aaKnown RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 MC2RQ01718 297 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 NHLH2Q02577 135 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 DLX2Q07687 328 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 MAMLD1Q13495 774 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 SEC23BQ15437 767 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 CSRP2Q16527 193 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 BAK1Q16611 211 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 VMACQ2NL98 169 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBRG1Q3YBR2 411 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TRIM60Q495X7 471 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 RBM20Q5T481 1227 aaKnown RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3GQ6DHY5 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 SFRP4Q6FHJ7 346 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3CQ6IPX1 549 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 DRICH1Q6PGQ1 229 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 LCNL1Q6ZST4 164 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GPRIN1Q7Z2K8 1008 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 CLNKQ7Z7G1 428 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TRABD2AQ86V40 505 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 DIS3L2Q8IYB7 885 aaKnown RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TBC1D3Q8IZP1 549 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 D2HGDHQ8N465 521 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 NGEFQ8N5V2 710 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 OR56A1Q8NGH5 318 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 SLC22A17Q8WUG5 538 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 OSCP1Q8WVF1 389 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 ZDHHC12Q96GR4 267 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GPR20Q99678 358 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 ZSWIM1Q9BR11 485 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 C17orf80Q9BSJ5 609 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 PLA2G12BQ9BX93 195 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 GHITMQ9H3K2 345 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 SMYD2Q9NRG4 433 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 FBXO28Q9NVF7 368 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TMLHEQ9NVH6 421 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 NKIRAS2Q9NYR9 191 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 EIF2B4Q9UI10 523 aaKnown RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 RAB21Q9UL25 225 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 PCDHA10Q9Y5I2 948 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TARBP1Q13395 1621 aaKnown RBP4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 TNIKQ9UKE5 1360 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 KIF27Q86VH2 1401 aa4.12□□□□□ -1.75
HMGB1P25-201ENST00000468402 A0A1B0GTW7 788 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 SH3D21A4FU49 640 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 AGAP5A6NIR3 686 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 AGPSO00116 658 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 PSMD9O00233 223 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 TNPO2O14787 897 aaKnown RBP4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 SUN1O94901 812 aa4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 PTMAP06454 111 aaKnown RBP4.11□□□□□ -1.75
HMGB1P25-201ENST00000468402 C1QTNF9P0C862 333 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms