RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 UBA3Q8TBC4 463 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 ULBP1Q9BZM6 244 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
HDAC1-203ENST00000463172 OSER1Q9NX31 292 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC1-203ENST00000463172 CFAP54Q96N23 3096 aa13.74□□□□□ -0.21
HDAC1-203ENST00000463172 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 AXIN1O15169 862 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 ZBTB24O43167 697 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 FBXO21O94952 628 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 RETP07949 1114 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 KDSRQ06136 332 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 MEA1Q16626 185 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 EOGTQ5NDL2 527 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 GRAMD4Q6IC98 578 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 IRGQQ8WZA9 623 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 PLD4Q96BZ4 506 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 HSFY1Q96LI6 401 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 TRIM62Q9BVG3 475 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 ABCC13Q9NSE7 274 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 MARK1Q9P0L2 795 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 NUDT5Q9UKK9 219 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 FRYLO94915 3013 aa13.73□□□□□ -0.21
HDAC1-203ENST00000463172 MYO18AQ92614 2054 aaKnown RBP13.73□□□□□ -0.21
HDAC1-203ENST00000463172 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 SLC12A8A0AV02 714 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 K7EQS6 105 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 MDM4O15151 490 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 LRP3O75074 770 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 TULP3O75386 442 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
HDAC1-203ENST00000463172 STC2O76061 302 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 TPM2P07951 284 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 LCP1P13796 627 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 SDHBP21912 280 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
HDAC1-203ENST00000463172 ACADSBP45954 432 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 SLC6A11P48066 632 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 PGFP49763 221 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 DGKEP52429 567 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 ZNF445P59923 1031 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 NAIF1Q69YI7 327 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-203ENST00000463172 SDE2Q6IQ49 451 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 PKN3Q6P5Z2 889 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 TPGS1Q6ZTW0 290 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 GAB3Q8WWW8 586 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 DNAJC17Q9NVM6 304 aaKnown RBP13.72□□□□□ -0.21
HDAC1-203ENST00000463172 APEX2Q9UBZ4 518 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 EBF1Q9UH73 591 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
HDAC1-203ENST00000463172 GPR179Q6PRD1 2367 aa13.72□□□□□ -0.21
HDAC1-203ENST00000463172 HRO43593 1189 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 CACNG3O60359 315 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 HMBSP08397 361 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 TYRP14679 529 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 CORO1AP31146 461 aaKnown RBP13.71□□□□□ -0.21
HDAC1-203ENST00000463172 USP8P40818 1118 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 ZNF132P52740 706 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 SNX16P57768 344 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 DMWDQ09019 674 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 GAB4Q2WGN9 574 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 PKDCCQ504Y2 493 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 USP39Q53GS9 565 aaKnown RBP13.71□□□□□ -0.21
HDAC1-203ENST00000463172 C10orf76Q5T2E6 689 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 BSPRYQ5W0U4 402 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 Q6ZNB5 142 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 KIAA2013Q8IYS2 634 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 NAT16Q8N8M0 369 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 TERB1Q8NA31 727 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 TFAP2BQ92481 460 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 KAT5Q92993 513 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
HDAC1-203ENST00000463172 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 TULP2O00295 520 aa13.7□□□□□ -0.22
HDAC1-203ENST00000463172 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
HDAC1-203ENST00000463172 THAP12O43422 761 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms