RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 DCAF4L1Q3SXM0 396 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 C1orf220Q5T0J3 134 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 SNX30Q5VWJ9 437 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ENOSF1Q7L5Y1 443 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF677Q86XU0 584 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ABI1Q8IZP0 508 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 ARHGAP24Q8N264 748 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 PPFIBP2Q8ND30 876 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 NCSTNQ92542 709 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 LPPQ93052 612 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 RBM15Q96T37 977 aaKnown RBP eCLIP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 VPS11Q9H270 941 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 YBX2Q9Y2T7 364 aaKnown RBP16.41■□□□□ 0.22
CMTM3-203ENST00000460097 HES2Q9Y543 173 aa16.41■□□□□ 0.22
CMTM3-203ENST00000460097 PTPRSQ13332 1948 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TM9SF1O15321 606 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 ENTPD5O75356 428 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 AP1G2O75843 785 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TJP3O95049 919 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 PIGRP01833 764 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 PROZP22891 400 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 SSR1P43307 286 aaKnown RBP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 MXI1P50539 228 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 CCDC6Q16204 474 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 DAB2IPQ5VWQ8 1189 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 PPP1R2P3Q6NXS1 205 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 OTOAQ7RTW8 1153 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TTC8Q8TAM2 541 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 AZIN2Q96A70 460 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TIFAQ96CG3 184 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 ZBTB45Q96K62 511 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 KREMEN1Q96MU8 473 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 CADM1Q9BY67 442 aaKnown RBP16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TRIM4Q9C037 500 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 DLGAP2Q9P1A6 1054 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
CMTM3-203ENST00000460097 TBKBP1A7MCY6 615 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 DNALI1O14645 258 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 ALOX15BO15296 676 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 GSC2O15499 205 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 CA3P07451 260 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 TSHRP16473 764 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 GTF2H1P32780 548 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 RAP1GDS1P52306 607 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 CUL3Q13618 768 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 MORF4L2Q15014 288 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 KHDC1Q4VXA5 237 aaKnown RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 HHATQ5VTY9 493 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 AGMOQ6ZNB7 445 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 SYCP3Q8IZU3 236 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 LRCH3Q96II8 777 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 NSL1Q96IY1 281 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 MIPEPQ99797 713 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 TMEM117Q9H0C3 514 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 CDT1Q9H211 546 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 NXF3Q9H4D5 531 aaKnown RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 SLC28A3Q9HAS3 691 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 RC3H2Q9HBD1 1191 aaKnown RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 DMAP1Q9NPF5 467 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 IL1RAPL1Q9NZN1 696 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 PSMC3IPQ9P2W1 217 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
CMTM3-203ENST00000460097 MTO1Q9Y2Z2 717 aaKnown RBP16.39■□□□□ 0.21
CMTM3-203ENST00000460097 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 MEIS3P2A8K0S8 358 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 CBX6O95503 412 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 PDHA1P08559 390 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 MCF2P10911 925 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 GATMP50440 423 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 SNX1Q13596 522 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 PAN2Q504Q3 1202 aaKnown RBP16.38■□□□□ 0.21
CMTM3-203ENST00000460097 EFHC2Q5JST6 749 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 CLLU1OSQ5K130 101 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 PPP1R15BQ5SWA1 713 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 GLB1LQ6UWU2 654 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 LRRC74BQ6ZQY2 392 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 CMTR2Q8IYT2 770 aaKnown RBP16.38■□□□□ 0.21
CMTM3-203ENST00000460097 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-203ENST00000460097 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 CASD1Q96PB1 797 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 APOL6Q9BWW8 343 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 RSAD1Q9HA92 442 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 SLCO1B3Q9NPD5 702 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 RNF19AQ9NV58 838 aa16.38■□□□□ 0.21
CMTM3-203ENST00000460097 GRID1Q9ULK0 1009 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms