RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ATG4AQ8WYN0 398 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 GPAMQ9HCL2 828 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 PRR23AA6NEV1 266 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 C5orf58C9J3I9 102 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 FOXN3O00409 490 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 KATNA1O75449 491 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SOAT2O75908 522 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CCDC130P13994 396 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CYP11B1P15538 503 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 S100A1P23297 94 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 BLMHQ13867 455 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 MED1Q15648 1581 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SLC22A9Q8IVM8 553 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SHCBP1Q8NEM2 672 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TBC1D10AQ9BXI6 508 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SLC39A10Q9ULF5 831 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ANKRD6Q9Y2G4 727 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 PRPF4O43172 522 aaKnown RBP eCLIP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DYNC1LI2O43237 492 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ASMTLO95671 621 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 NR3C2P08235 984 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TKTP29401 623 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DMPKQ09013 629 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ZC2HC1CQ53FD0 456 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DHFR2Q86XF0 187 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CENPLQ8N0S6 344 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TMC2Q8TDI7 906 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DGCR14Q96DF8 476 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 COMMD8Q9NX08 183 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 IMPAD1Q9NX62 359 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SH3GLB1Q9Y371 365 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SUPT3HB4E1H0 165 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TRDMT1O14717 391 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CLOCKO15516 846 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ANXA9O76027 345 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 LCA5LO95447 670 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SLC25A27O95847 323 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ANPEPP15144 967 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 HK2P52789 917 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 NCALDP61601 193 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CUL2Q13617 745 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 CEP44Q9C0F1 390 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 EIF3LQ9Y262 564 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TPRKBQ9Y3C4 175 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 SNX9Q9Y5X1 595 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DDTLA6NHG4 134 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 RBP1P09455 135 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ITGA4P13612 1032 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ALDH1A3P47895 512 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 MTTPP55157 894 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 RAB15P59190 212 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 KCNJ2P63252 427 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 RRP1BQ14684 758 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 TMEM132DQ14C87 1099 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 GPAT2Q6NUI2 795 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DDX53Q86TM3 631 aaKnown RBP14.32□□□□□ -0.12
ITGB4-202ENST00000449880 PHACTR1Q9C0D0 580 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 RMND5AQ9H871 391 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 NCKIPSDQ9NZQ3 722 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 DKK3Q9UBP4 350 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 KLHL3Q9UH77 587 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 ZSCAN5CA6NGD5 496 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-202ENST00000449880 CNOT3O75175 753 aaKnown RBP14.31□□□□□ -0.12
ITGB4-202ENST00000449880 RXRGP48443 463 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 PDK4Q16654 411 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 CCDC142Q17RM4 750 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 ARMC4Q5T2S8 1044 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 LAYNQ6UX15 382 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 PALB2Q86YC2 1186 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 FAM118BQ9BPY3 351 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 AK5Q9Y6K8 562 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 SGPL1O95470 568 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 CAP2P40123 477 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 LAMC2Q13753 1193 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 TRIM25Q14258 630 aaKnown RBP14.31□□□□□ -0.12
ITGB4-202ENST00000449880 SAMD4BQ5PRF9 694 aaKnown RBP14.31□□□□□ -0.12
ITGB4-202ENST00000449880 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 VPS37AQ8NEZ2 397 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 NDNQ99608 321 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 SH2D3AQ9BRG2 576 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 GRIP2Q9C0E4 1043 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 KIAA1683Q9H0B3 1180 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 KCNH7Q9NS40 1196 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
ITGB4-202ENST00000449880 MAFGO15525 162 aa14.31□□□□□ -0.12
ITGB4-202ENST00000449880 RARBP10826 455 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms