RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TBCBQ99426 244 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CYP4F11Q9HBI6 524 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 NGRNQ9NPE2 291 aaKnown RBP13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 COMMD8Q9NX08 183 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 IL37Q9NZH6 218 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FBXW11Q9UKB1 542 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PCDHA3Q9Y5H8 950 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 C5orf42Q9H799 3197 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PRRG1O14668 218 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CAPN9O14815 690 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZNF185O15231 689 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GRM6O15303 877 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CXCL14O95715 111 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KRT1P04264 644 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PCK1P35558 622 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RWDD2BP57060 319 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 YWHAGP61981 247 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ATP11AP98196 1134 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PLD1Q13393 1074 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SH3PXD2AQ5TCZ1 1133 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SEL1L2Q5TEA6 688 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 LRRC38Q5VT99 294 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 BEND5Q7L4P6 421 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 STRADAQ7RTN6 431 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GPR152Q8TDT2 470 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PBKQ96KB5 322 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KLHL5Q96PQ7 755 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NPY6RQ99463 290 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NCAPGQ9BPX3 1015 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GMIPQ9P107 970 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PRKAG3Q9UGI9 489 aa13.27□□□□□ -0.29
HLA-DRB9-201ENST00000449413 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 HIDE1A8MVS5 230 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 H3BNC9 293 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 TGM5O43548 720 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GLUD1P00367 558 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FYNP06241 537 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KRT7P08729 469 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NCAM1P13591 858 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 TFE3P19532 575 aaPredicted RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 YWHAQP27348 245 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MIPP30301 263 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ELF1P32519 619 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PEX5P50542 639 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 HDAC4P56524 1084 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GPM6BQ13491 265 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 VEPH1Q14D04 833 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 HADHQ16836 314 aaKnown RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RAB6CQ53S08 254 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 SYPL2Q5VXT5 272 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CYP4V2Q6ZWL3 525 aaPredicted RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 BNIPLQ7Z465 357 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CREG2Q8IUH2 290 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 GIPC2Q8TF65 315 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CENPIQ92674 756 aaPredicted RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PEBP4Q96S96 227 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RAB6CQ9H0N0 254 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FAM204AQ9H8W3 233 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ABCC13Q9NSE7 274 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 KLHL11Q9NVR0 708 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 DDX56Q9NY93 547 aaKnown RBP13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 EHD2Q9NZN4 543 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CEP104O60308 925 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CSH1P0DML2 217 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 CSH2P0DML3 217 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 IL1R2P27930 398 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 IRS1P35568 1242 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PSEN1P49768 467 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZP2Q05996 745 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 TWF1Q12792 350 aa13.25□□□□□ -0.29
HLA-DRB9-201ENST00000449413 ZNF211Q13398 564 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms