RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PRKAG3Q9UGI9 489 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 CHORDC1Q9UHD1 332 aaPredicted RBP7.81□□□□□ -1.16
LINC01049-201ENST00000426840 CYTH4Q9UIA0 394 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 NOCTQ9UK39 431 aaKnown RBP7.81□□□□□ -1.16
LINC01049-201ENST00000426840 CDH7Q9ULB5 785 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 MYO6Q9UM54 1294 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 CAPN11Q9UMQ6 739 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 DENND4CQ5VZ89 1909 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 COL6A3P12111 3177 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 DENND4AQ7Z401 1863 aa7.81□□□□□ -1.16
LINC01049-201ENST00000426840 ITIH6Q6UXX5 1313 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 ANAPC1Q9H1A4 1944 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 A0A1W2PQJ5 194 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF840PA6NDX5 716 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 M0QYV0 167 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 MMEP08473 750 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SETSIPP0DME0 302 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 CDC25CP30307 473 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 CDH5P33151 784 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 KRT9P35527 623 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 PPP3CCP48454 512 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 RGS7P49802 495 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 CYP4F8P98187 520 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 RNFT1Q5M7Z0 435 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 STXBP5Q5T5C0 1151 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SNX30Q5VWJ9 437 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 E4F1Q66K89 784 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 GET4Q7L5D6 327 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 OTOP3Q7RTS5 596 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SCD5Q86SK9 330 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 TMEM110Q86TL2 294 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 MON1AQ86VX9 555 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 VSTM4Q8IW00 320 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SCML4Q8N228 414 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 OLIG1Q8TAK6 271 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SLC20A1Q8WUM9 679 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 CPLX3Q8WVH0 158 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 OVCA2Q8WZ82 227 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 NDRG1Q92597 394 aaKnown RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 GTPBP3Q969Y2 492 aaKnown RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 HSFY1Q96LI6 401 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 NECAB3Q96P71 396 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SYT11Q9BT88 431 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 ULBP1Q9BZM6 244 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 TRIM5Q9C035 493 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 FBXO44Q9H4M3 255 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 TASP1Q9H6P5 420 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 NMUR1Q9HB89 426 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 EHD2Q9NZN4 543 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 EPS15L1Q9UBC2 864 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 SCML2Q9UQR0 700 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 ZFP37Q9Y6Q3 630 aaPredicted RBP7.8□□□□□ -1.16
LINC01049-201ENST00000426840 PRUNE2Q8WUY3 3088 aa7.8□□□□□ -1.16
LINC01049-201ENST00000426840 EYSQ5T1H1 3165 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 LRRC53A6NM62 1247 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ANHXE9PGG2 379 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 CYP1A1P04798 512 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 GYPCP04921 128 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TPM3P06753 285 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 USP17L7P0C7H9 530 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 FERP16591 822 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 SP100P23497 879 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 MSX1P28360 303 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 WEE1P30291 646 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 PRKCIP41743 596 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF75DP51815 510 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TKTL1P51854 596 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 SLC8A3P57103 927 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ZBED6P86452 979 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 FMO1Q01740 532 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 CDR2Q01850 454 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ARID5AQ03989 594 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 IFRD2Q12894 506 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TBX2Q13207 712 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 FAM78AQ5JUQ0 283 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 GPR158Q5T848 1215 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TAF3Q5VWG9 929 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 SPECC1LQ69YQ0 1117 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TXNDC8Q6A555 127 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 CCDC186Q7Z3E2 898 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ZNF677Q86XU0 584 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ARID3BQ8IVW6 561 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 ST13P5Q8NFI4 369 aaPredicted RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 MRPS31Q92665 395 aaKnown RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 FBXO32Q969P5 355 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 IQCDQ96DY2 449 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 SLC22A12Q96S37 553 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 CYP2S1Q96SQ9 504 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 AGPAT1Q99943 283 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 RPP25Q9BUL9 199 aaKnown RBP7.79□□□□□ -1.16
LINC01049-201ENST00000426840 RNF38Q9H0F5 515 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 TRPV4Q9HBA0 871 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 LRRC4Q9HBW1 653 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 OSER1Q9NX31 292 aa7.79□□□□□ -1.16
LINC01049-201ENST00000426840 GDE1Q9NZC3 331 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms