RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ETFBKMTQ8IXQ9 262 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 SIX6OS1Q8N1H7 587 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 FAM126AQ9BYI3 521 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 SEMA4AQ9H3S1 761 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 SPHK2Q9NRA0 654 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 FANCLQ9NW38 375 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 ZSCAN32Q9NX65 697 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
IGHV3-47-201ENST00000425060 ZFHX2Q9C0A1 2572 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 PRR23AA6NEV1 266 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 K7EQS6 105 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 HOXC11O43248 304 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 RNF40O75150 1001 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 CHRM1P11229 460 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 STX1AQ16623 288 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 BTBD8Q5XKL5 378 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 PHTF2Q8N3S3 785 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 STK32AQ8WU08 396 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 IRGQQ8WZA9 623 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 NKD2Q969F2 451 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 MARCH2Q9P0N8 246 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 CYTH4Q9UIA0 394 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 RASAL2Q9UJF2 1139 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 LSM7Q9UK45 103 aaKnown RBP18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
IGHV3-47-201ENST00000425060 ATG2BQ96BY7 2078 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 USP34Q70CQ2 3546 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 ANTXRLA6NF34 631 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 PIK3R2O00459 728 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 MED7O43513 233 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 GNA15P30679 374 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 HOXA6P31267 233 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 HOXC13P31276 330 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 CLCN1P35523 988 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 NCAPHQ15003 741 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 KRT31Q15323 416 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 KLHDC7AQ5VTJ3 777 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 ZC3H14Q6PJT7 736 aaKnown RBP18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 CLEC4CQ8WTT0 213 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 P2RY11Q96G91 374 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 PNKPQ96T60 521 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 SLC4A5Q9BY07 1137 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 OLA1Q9NTK5 396 aaKnown RBP18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 MARK1Q9P0L2 795 aa18.75■□□□□ 0.59
IGHV3-47-201ENST00000425060 THAP12O43422 761 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 GFRA3O60609 400 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 ATG13O75143 517 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 FBXO21O94952 628 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 USP8P40818 1118 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 PPP2R5DQ14738 602 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 RSRC2Q7L4I2 434 aaKnown RBP18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 TMEM110Q86TL2 294 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 FAM71AQ8IYT1 594 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 WDTC1Q8N5D0 677 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 EDEM1Q92611 657 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 HSD3B7Q9H2F3 369 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 PCDHGC3Q9UN70 934 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 ZNF510Q9Y2H8 683 aa18.74■□□□□ 0.59
IGHV3-47-201ENST00000425060 SLC12A8A0AV02 714 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 FYNP06241 537 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 NRLP54845 237 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 MYL5Q02045 173 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 TYRO3Q06418 890 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 DMWDQ09019 674 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 TRIP4Q15650 581 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 ANO4Q32M45 955 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 MSANTD2Q6P1R3 559 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 SFTPA1Q8IWL2 248 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 SCUBE3Q8IX30 993 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 SUMF1Q8NBK3 374 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 USP33Q8TEY7 942 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 DCLK3Q9C098 648 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 VPS16Q9H269 839 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 PLCB1Q9NQ66 1216 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 SFMBT1Q9UHJ3 866 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 AGO1Q9UL18 857 aaKnown RBP18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 STRIP2Q9ULQ0 834 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 FHOD1Q9Y613 1164 aa18.73■□□□□ 0.59
IGHV3-47-201ENST00000425060 KIAA1549LQ6ZVL6 1849 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 LRRC10BA6NIK2 292 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 TULP3O75386 442 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 KAT7O95251 611 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 LTFP02788 710 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 HMBSP08397 361 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 PNMA6AP0CW24 399 aaPredicted RBP18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 UCHL3P15374 230 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 ZNF18P17022 549 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 CORO1AP31146 461 aaKnown RBP18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 GRIA2P42262 883 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 ACADSBP45954 432 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 PTK2Q05397 1052 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 DRAP1Q14919 205 aaPredicted RBP18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 FMNL3Q8IVF7 1028 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 NAT16Q8N8M0 369 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms