RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
HLA-DMB-258ENST00000418107 SF3B1O75533 1304 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 EFCAB8A8MWE9 144 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 M0QZQ0 153 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 CCL16O15467 120 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TADA3O75528 432 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 PROSCO94903 275 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 CYP11A1P05108 521 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 C8AP07357 584 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TYMPP19971 482 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 RNASE9P60153 205 aaKnown RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TUBB4BP68371 445 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 FAM102AQ5T9C2 384 aaPredicted RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 FAM171A1Q5VUB5 890 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 CEP57Q86XR8 500 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 XYLT1Q86Y38 959 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 FGF13Q92913 245 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 HNRNPABQ99729 332 aaKnown RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TTPALQ9BTX7 342 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 METTL5Q9NRN9 209 aaKnown RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 SPATA6Q9NWH7 488 aaPredicted RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 MTF2Q9Y483 593 aaPredicted RBP13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
HLA-DMB-258ENST00000418107 TSC2P49815 1807 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CCDC66A2RUB6 948 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 TMEM191CA6NGB0 347 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 E5RJQ4 531 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CLDN5O00501 218 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CES2O00748 559 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 ADAM12O43184 909 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 LCP1P13796 627 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 PSMA2P25787 234 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 ACADSBP45954 432 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 GABRB2P47870 512 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CDR1P51861 262 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 UBXN2BQ14CS0 331 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 MLF2Q15773 248 aaPredicted RBP13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 PSMD5Q16401 504 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 SEL1L2Q5TEA6 688 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 PMF1Q6P1K2 205 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 PIK3R5Q8WYR1 880 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 MS4A14Q96JA4 679 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 DDX23Q9BUQ8 820 aaKnown RBP13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 DLL3Q9NYJ7 618 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 TJP2Q9UDY2 1190 aa13.79□□□□□ -0.2
HLA-DMB-258ENST00000418107 MYBPHLA2RUH7 354 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 TMEM189-UBE2V1I3L0A0 370 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 TULP2O00295 520 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 DDX3YO15523 660 aaKnown RBP13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 AP1G2O75843 785 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 DESP17661 470 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 CD72P21854 359 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 CTNNA2P26232 953 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 GJC1P36383 396 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 YWHAHQ04917 246 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 PIGHQ14442 188 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 PKDCCQ504Y2 493 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 ODF2Q5BJF6 829 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 FAM183BPQ6ZVS7 135 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 FUKQ8N0W3 1084 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 TSC1Q92574 1164 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 MCRS1Q96EZ8 462 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 SMARCAL1Q9NZC9 954 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
HLA-DMB-258ENST00000418107 FAM170BA6NMN3 283 aa13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 PGRMC1O00264 195 aaKnown RBP13.77□□□□□ -0.21
HLA-DMB-258ENST00000418107 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms