RNA–Protein interactions for RNA: ENST00000411249.1

RNU6-1199P-201, Transcript of RNA, U6 small nuclear 1199, pseudogene, humanhuman

BASIC

Gene RNU6-1199P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1199P-201ENST00000411249 TIAL1Q01085 375 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 KCNAB1Q14722 419 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 EARS2Q5JPH6 523 aaKnown RBP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 B3GNT9Q6UX72 402 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 C9orf47Q6ZRZ4 202 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CCDC149Q6ZUS6 474 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FAM57BQ71RH2 274 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MICU3Q86XE3 530 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 METTL25Q8N6Q8 603 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PNPLA1Q8N8W4 532 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 EDC3Q96F86 508 aaKnown RBP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 WDYHV1Q96HA8 205 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ZNF668Q96K58 619 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 AIFM3Q96NN9 605 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TUBB6Q9BUF5 446 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 DPH1Q9BZG8 443 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ZCWPW1Q9H0M4 648 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FAM204AQ9H8W3 233 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ATP6V0A4Q9HBG4 840 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TRIM36Q9NQ86 728 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 DNAJB11Q9UBS4 358 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 IPO11Q9UI26 975 aaKnown RBP2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MID2Q9UJV3 735 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 COG5Q9UP83 839 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 SLC27A6Q9Y2P4 619 aa2.4□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TRIM43BA6NCK2 446 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MBD3L4A6NDZ8 208 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MBD3L3A6NE82 208 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 A8MVJ9 347 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TTC34A8MYJ7 566 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ISM1B1AKI9 464 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PRR23D1E9PI22 279 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 AGPSO00116 658 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MGEA5O60502 916 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PRAMEF2O60811 474 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 NDUFB8O95169 186 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PDGFRBP09619 1106 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PRR23D2P0DMB1 279 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TMIGD3P0DMS9 266 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ATF7P17544 494 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ACVR2AP27037 513 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 GALNSP34059 522 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 NANOS2P60321 138 aaKnown RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FMO1Q01740 532 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CFHR1Q03591 330 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PPATQ06203 517 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MCL1Q07820 350 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 BFSP2Q13515 415 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ERV3-1Q14264 604 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CNN3Q15417 329 aaKnown RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CNGA3Q16281 694 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MINDY4Q4G0A6 757 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ZNF585BQ52M93 769 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 DEF8Q6ZN54 512 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 UNC13DQ70J99 1090 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 EPM2AIP1Q7L775 607 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 OVCH2Q7RTZ1 564 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 UEVLDQ8IX04 471 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 LINC01465Q8N7H1 131 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MPLKIPQ8TAP9 179 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ASB5Q8WWX0 329 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MAML1Q92585 1016 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TRIM43Q96BQ3 446 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FCRL5Q96RD9 977 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TM2D2Q9BX73 214 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 LRRC27Q9C0I9 530 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CHST8Q9H2A9 424 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FAM83DQ9H4H8 585 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MRPL44Q9H9J2 332 aaKnown RBP2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 STK32BQ9NY57 414 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ZNF212Q9UDV6 495 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FZD4Q9ULV1 537 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 HPSEQ9Y251 543 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PCDHB2Q9Y5E7 798 aa2.39□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TMEM272A0A1B0GTI8 110 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 C2CD4BA6NLJ0 364 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PRSS44E7EML9 344 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 FAM227AF5H4B4 570 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 SMAD6O43541 496 aaKnown RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 U2AF1L5P0DN76 240 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 TXNP10599 105 aaKnown RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ST6GAL1P15907 406 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 BTF3P20290 206 aaKnown RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 RBL1P28749 1068 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 ALDH7A1P49419 539 aaKnown RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 CACNB3P54284 484 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 SLC12A2P55011 1212 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 WDR5P61964 334 aaKnown RBP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 U2AF1Q01081 240 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 RHDQ02161 417 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PTGR1Q14914 329 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 KIAA0753Q2KHM9 967 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 P3H1Q32P28 736 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 RNF220Q5VTB9 566 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 PLAG1Q6DJT9 500 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 MZT2AQ6P582 158 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 APOA5Q6Q788 366 aa2.38□□□□□ -2.03
RNU6-1199P-201ENST00000411249 USP49Q70CQ1 688 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms