RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NR2C2P49116 596 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 NDST1P52848 882 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SNX16P57768 344 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 RBP5P82980 135 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 KLC1Q07866 573 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 KPNB1Q14974 876 aaKnown RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 ZRSR2Q15696 482 aaKnown RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SLC10A6Q3KNW5 377 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SNX30Q5VWJ9 437 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 OLFML1Q6UWY5 402 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 UNC5AQ6ZN44 842 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 ZDHHC17Q8IUH5 632 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 PRR11Q96HE9 360 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SLC4A5Q9BY07 1137 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 C1orf21Q9H246 121 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 NMRK1Q9NWW6 199 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 LRCH1Q9Y2L9 728 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 NEBLO76041 1014 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 APRTP07741 180 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 GRIK3Q13003 919 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 RCN1Q15293 331 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 CCDC6Q16204 474 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 MUM1Q2TAK8 710 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 IRGCQ6NXR0 463 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 CDR2LQ86X02 465 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 XAB2Q9HCS7 855 aaKnown RBP17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
LIMS2-208ENST00000410011 SLC25A27O95847 323 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 TMPRSS15P98073 1019 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 SLC6A3Q01959 620 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 TTC7BQ86TV6 843 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 NUDCD3Q8IVD9 361 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 KHSRPQ92945 711 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 FAM167BQ9BTA0 163 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 ASCC2Q9H1I8 757 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 DNAJB4Q9UDY4 337 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 C22orf31O95567 290 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 BPGMP07738 259 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 GJB1P08034 283 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 SDC4P31431 198 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 PGM1P36871 562 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 CLCN3P51790 818 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 AP1B1Q10567 949 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 WASHC5Q12768 1159 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 TMEM132DQ14C87 1099 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 RAB6CQ53S08 254 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 ZNF484Q5JVG2 852 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 KYAT3Q6YP21 454 aaKnown RBP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 ZNF534Q76KX8 674 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 CRLF3Q8IUI8 442 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 ACMSDQ8TDX5 336 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 PIWIL1Q96J94 861 aaKnown RBP17.29■□□□□ 0.36
LIMS2-208ENST00000410011 FGD4Q96M96 766 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 RAB6CQ9H0N0 254 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 PDZD7Q9H5P4 517 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 NRDE2Q9H7Z3 1164 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 PCDHA11Q9Y5I1 949 aa17.29■□□□□ 0.36
LIMS2-208ENST00000410011 HMX2A2RU54 273 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 IRF6O14896 467 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 TBX10O75333 385 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 SKIP12755 728 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 CDC25CP30307 473 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 PSEN1P49768 467 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 DPYSL2Q16555 572 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 DNAL1Q4LDG9 190 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 NET1Q7Z628 596 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-208ENST00000410011 FAM172AQ8WUF8 416 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 STMN2Q93045 179 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 SNRNP25Q9BV90 132 aaKnown RBP17.28■□□□□ 0.36
LIMS2-208ENST00000410011 STN1Q9H668 368 aaKnown RBP17.28■□□□□ 0.36
LIMS2-208ENST00000410011 THAP1Q9NVV9 213 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 TAGLN3Q9UI15 199 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
LIMS2-208ENST00000410011 B2RBV5 119 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 CAPN9O14815 690 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 ALDH1A2O94788 518 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 NPTXRO95502 500 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 SERPINA6P08185 405 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 LINGO3P0C6S8 592 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 MLNP12872 115 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 PTPN9P43378 593 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 SEMA5AQ13591 1074 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 CHI3L2Q15782 390 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 CDO1Q16878 200 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 LRRC74BQ6ZQY2 392 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 ALYREFQ86V81 257 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms