RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GRB10Q13322 594 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZC3H12BQ5HYM0 836 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 RARS2Q5T160 578 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 MARC1Q5VT66 337 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CYB5D1Q6P9G0 228 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 PRUNE1Q86TP1 453 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CEP19Q96LK0 163 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 POP1Q99575 1024 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 LRRC40Q9H9A6 602 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 H2AFY2Q9P0M6 372 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 TNFSF13BQ9Y275 285 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TBL1XO60907 577 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 CYP2C18P33260 490 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MARSP56192 900 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 MYL6P60660 151 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZKSCAN8Q15776 578 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 GPR158Q5T848 1215 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TSHZ1Q6ZSZ6 1077 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 DENND5BQ6ZUT9 1274 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TRMT10CQ7L0Y3 403 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 OTULINQ96BN8 352 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CCDC126Q96EE4 140 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 OSBPL9Q96SU4 736 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MICAL2O94851 1124 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 JAK1P23458 1154 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 EIF4BP23588 611 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 LRRC74AQ0VAA2 488 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ORC1Q13415 861 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 NAB2Q15742 525 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SARM1Q6SZW1 724 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ADGRA1Q86SQ6 560 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 KRT78Q8N1N4 520 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ANKS1AQ92625 1134 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 PANX3Q96QZ0 392 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 INTS7Q9NVH2 962 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 GMEB2Q9UKD1 530 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 IRS2Q9Y4H2 1338 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PIK3CDO00329 1044 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ATG13O75143 517 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PTPN2P17706 415 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 FNTAP49354 379 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 INSCQ1MX18 579 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ZNF720Q7Z2F6 126 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ZSCAN18Q8TBC5 510 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 HPS3Q969F9 1004 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 EIF2AQ9BY44 585 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 SCHIP1Q9P0W5 487 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 FRMPD4Q14CM0 1322 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GRM6O15303 877 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 NCK2O43639 380 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 TMEM253P0C7T8 217 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 KITP10721 976 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 RARGP13631 454 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 SMTNL2Q2TAL5 461 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PRR23BQ6ZRT6 265 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CASP10Q92851 521 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 E2F7Q96AV8 911 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 SEPT3Q9UH03 358 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP47-203ENST00000399455 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 SSU72P8A0A1W2PR75 194 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 QSOX1O00391 747 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GPC1P35052 558 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 HSPA9P38646 679 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 UBXN2BQ14CS0 331 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 COBLL1Q53SF7 1204 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 OTOP3Q7RTS5 596 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 KCNB2Q92953 911 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 BTBD6Q96KE9 485 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 FICDQ9BVA6 458 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 RMND5AQ9H871 391 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GUCY1B2O75343 617 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GCATO75600 419 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GUCA1CO95843 209 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ZNF200P98182 395 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 NNTQ13423 1086 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 KLHDC7AQ5VTJ3 777 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ZCCHC8Q6NZY4 707 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 BRSK2Q8IWQ3 736 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PPIL6Q8IXY8 311 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CHPFQ8IZ52 775 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 POPDC2Q9HBU9 364 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PTPN1P18031 435 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 STIP1P31948 543 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 ESRRGP62508 458 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 VSIG10LQ86VR7 867 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CBWD2Q8IUF1 395 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms