RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
ITSN1-208ENST00000399349 VPS28Q9UK41 221 aa13.56□□□□□ -0.24
ITSN1-208ENST00000399349 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
ITSN1-208ENST00000399349 SOX13Q9UN79 622 aa13.56□□□□□ -0.24
ITSN1-208ENST00000399349 RIPK2O43353 540 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DNAJB2P25686 324 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ITIH4Q14624 930 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CYP51A1Q16850 503 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 BNIPLQ7Z465 357 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ZNF614Q8N883 585 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 TCP10LQ8TDR4 215 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 KAT5Q92993 513 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 EIF3LQ9Y262 564 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ACADSP16219 412 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ATP6V1B2P21281 511 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 AADACL2Q6P093 401 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 RNF103O00237 685 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 USP12O75317 370 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 PGM5Q15124 567 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ZCCHC23Q6ZST2 131 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 RNF180Q86T96 592 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 DDX4Q9NQI0 724 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 KCND1Q9NSA2 647 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 PLA2G6O60733 806 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CENPAP49450 140 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 OXCT1P55809 520 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CHRNB3Q05901 458 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 ISLR2Q6UXK2 745 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 IZUMO2Q6UXV1 221 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 UBE2OQ9C0C9 1292 aaKnown RBP13.55□□□□□ -0.24
ITSN1-208ENST00000399349 MRGBPQ9NV56 204 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
ITSN1-208ENST00000399349 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 A0A0A6YYK5 440 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 EFCAB14O75071 495 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 ZNF682O95780 498 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 VEGFAP15692 232 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 AMPD1P23109 780 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 GPC1P35052 558 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CBWD6Q4V339 395 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CBWD3Q5JTY5 395 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CBWD5Q5RIA9 395 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 N4BP2L1Q5TBK1 243 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PGLYRP2Q96PD5 576 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 DCLK3Q9C098 648 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 DNPEPQ9ULA0 475 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 SARSP49591 514 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 ALDH6A1Q02252 535 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PGS1Q32NB8 556 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 RINLQ6ZS11 566 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 C3orf20Q8ND61 904 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PAWRQ96IZ0 340 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CLPBQ9H078 707 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 SNUPNO95149 360 aaKnown RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CALB2P22676 271 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 ABCG1P45844 678 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 TCHHL1Q5QJ38 904 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PDPK2PQ6A1A2 396 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 HIST2H2AA3Q6FI13 130 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 OTOP1Q7RTM1 612 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 SPATA16Q9BXB7 569 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 CHD1O14646 1710 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 UNC13BO14795 1591 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 MAGEA13PA6NCF6 341 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 MEI4A8MW99 385 aa13.54□□□□□ -0.24
ITSN1-208ENST00000399349 PRR23D1E9PI22 279 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms