RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CHURC1-FNTBB4DL54 471 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 E7ENQ6 273 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 HOXC13P31276 330 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 FNTBP49356 437 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 COG7P83436 770 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 SASS6Q6UVJ0 657 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 ACP6Q9NPH0 428 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 POLR3BQ9NW08 1133 aaPredicted RBP32.22■■■□□ 2.75
CMTM4-202ENST00000394106 SLC8A2Q9UPR5 921 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 KIAA1549LQ6ZVL6 1849 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 THAP12O43422 761 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 LILRB5O75023 590 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 GABBR2O75899 941 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 EIF2DP41214 584 aaKnown RBP32.21■■■□□ 2.75
CMTM4-202ENST00000394106 BSPRYQ5W0U4 402 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 TPGS1Q6ZTW0 290 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 EDEM1Q92611 657 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 SIX2Q9NPC8 291 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 ARHGEF4Q9NR80 690 aa32.21■■■□□ 2.75
CMTM4-202ENST00000394106 SLC12A8A0AV02 714 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 BECN2A8MW95 431 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP32.2■■■□□ 2.75
CMTM4-202ENST00000394106 K7EQS6 105 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 HOXC11O43248 304 aaPredicted RBP32.2■■■□□ 2.75
CMTM4-202ENST00000394106 MED7O43513 233 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 APODP05090 189 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 GNA15P30679 374 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 DAOAP59103 153 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 MESP2Q0VG99 397 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 TCP11X2Q5H9J9 407 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 DENND1BQ6P3S1 775 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 Q6ZNB5 142 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 ENOX1Q8TC92 643 aaKnown RBP32.2■■■□□ 2.75
CMTM4-202ENST00000394106 RNF139Q8WU17 664 aa32.2■■■□□ 2.75
CMTM4-202ENST00000394106 OLA1Q9NTK5 396 aaKnown RBP32.2■■■□□ 2.75
CMTM4-202ENST00000394106 AJAP1Q9UKB5 411 aaPredicted RBP32.2■■■□□ 2.75
CMTM4-202ENST00000394106 KAT7O95251 611 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 EEF1GP26641 437 aaKnown RBP32.19■■■□□ 2.74
CMTM4-202ENST00000394106 C2orf27AQ580R0 203 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 CCDC183Q5T5S1 534 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 SFTPA1Q8IWL2 248 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 SCML4Q8N228 414 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 CCDC26Q8TAB7 109 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 ZNF606Q8WXB4 792 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 HSFY1Q96LI6 401 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 BBS2Q9BXC9 721 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 MIS12Q9H081 205 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 ST7Q9NRC1 585 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 DNAJC12Q9UKB3 198 aa32.19■■■□□ 2.74
CMTM4-202ENST00000394106 USP34Q70CQ2 3546 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 NEDD8-MDP1E9PL57 170 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 KLKB1P03952 638 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 CORO1AP31146 461 aaKnown RBP32.18■■■□□ 2.74
CMTM4-202ENST00000394106 C11orf57Q6ZUT1 292 aaPredicted RBP32.18■■■□□ 2.74
CMTM4-202ENST00000394106 ETFBKMTQ8IXQ9 262 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 CLEC4CQ8WTT0 213 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 SHC3Q92529 594 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 ACDQ96AP0 544 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 DCLK3Q9C098 648 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 ABCC13Q9NSE7 274 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 ANO10Q9NW15 660 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 TAB2Q9NYJ8 693 aa32.18■■■□□ 2.74
CMTM4-202ENST00000394106 ANTXRLA6NF34 631 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 TULP3O75386 442 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 GRIA2P42262 883 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 GPD2P43304 727 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 PXNP49023 591 aaPredicted RBP32.17■■■□□ 2.74
CMTM4-202ENST00000394106 LONP2Q86WA8 852 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 FMNL3Q8IVF7 1028 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 SUMF1Q8NBK3 374 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 USP33Q8TEY7 942 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 IRGQQ8WZA9 623 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 DEC1Q9P2X7 70 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 SFMBT1Q9UHJ3 866 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 ZNF510Q9Y2H8 683 aa32.17■■■□□ 2.74
CMTM4-202ENST00000394106 STX1AQ16623 288 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 DENND1CQ8IV53 801 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 GOLGA1Q92805 767 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 BHMTQ93088 406 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 HHIPQ96QV1 700 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 HINFPQ9BQA5 517 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 EPC1Q9H2F5 836 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 WDR35Q9P2L0 1181 aa32.16■■■□□ 2.74
CMTM4-202ENST00000394106 FBXO21O94952 628 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 TYRP14679 529 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 HOXA6P31267 233 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 DMC1Q14565 340 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 SYT13Q7L8C5 426 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 PHTF2Q8N3S3 785 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 PLD4Q96BZ4 506 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 DNAJC17Q9NVM6 304 aaKnown RBP32.15■■■□□ 2.74
CMTM4-202ENST00000394106 MARK1Q9P0L2 795 aa32.15■■■□□ 2.74
CMTM4-202ENST00000394106 AGO1Q9UL18 857 aaKnown RBP32.15■■■□□ 2.74
CMTM4-202ENST00000394106 SMG5Q9UPR3 1016 aaKnown RBP32.15■■■□□ 2.74
CMTM4-202ENST00000394106 DMDP11532 3685 aa32.14■■■□□ 2.74
CMTM4-202ENST00000394106 LTFP02788 710 aa32.14■■■□□ 2.74
CMTM4-202ENST00000394106 KCNMA1Q12791 1236 aa32.14■■■□□ 2.74
CMTM4-202ENST00000394106 SRSF5Q13243 272 aaKnown RBP32.14■■■□□ 2.74
CMTM4-202ENST00000394106 SCUBE3Q8IX30 993 aa32.14■■■□□ 2.74
CMTM4-202ENST00000394106 CCDC33Q8N5R6 958 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms