RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 LSM7Q9UK45 103 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 ANKRD6Q9Y2G4 727 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 NFE2L3Q9Y4A8 694 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 SLCO1B1Q9Y6L6 691 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 LAMA5O15230 3695 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 A8MXQ7 604 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 H0Y8X5 98 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 CACNG3O60359 315 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 CLSTN1O94985 981 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 CISD3P0C7P0 127 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 HNF1BP35680 557 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 IL12RB1P42701 662 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 CCT8P50990 548 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 AFF3P51826 1226 aaKnown RBP10.21□□□□□ -0.77
IFT88-203ENST00000389373 TARDBPQ13148 414 aaKnown RBP eCLIP10.21□□□□□ -0.77
IFT88-203ENST00000389373 PTPRNQ16849 979 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 RILPL1Q5EBL4 403 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 L1TD1Q5T7N2 865 aaKnown RBP10.21□□□□□ -0.77
IFT88-203ENST00000389373 HTR3DQ70Z44 454 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 ADAT2Q7Z6V5 191 aaKnown RBP10.21□□□□□ -0.77
IFT88-203ENST00000389373 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
IFT88-203ENST00000389373 OVCA2Q8WZ82 227 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 HVCN1Q96D96 273 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 CBWD1Q9BRT8 395 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 ELOVL4Q9GZR5 314 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 ST6GALNAC4Q9H4F1 302 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.77
IFT88-203ENST00000389373 INTS13Q9NVM9 706 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 NME7Q9Y5B8 376 aa10.21□□□□□ -0.77
IFT88-203ENST00000389373 PTPRJQ12913 1337 aa10.21□□□□□ -0.78
IFT88-203ENST00000389373 ACACAQ13085 2346 aa10.21□□□□□ -0.78
IFT88-203ENST00000389373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
IFT88-203ENST00000389373 TEX51A0A1B0GUA7 166 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 CBX4O00257 560 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 ENC1O14682 589 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 ARHGAP6O43182 974 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 FSBPO95073 299 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 TBX18O95935 607 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 APC2O95996 2303 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 GARTP22102 1010 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 SLC5A3P53794 718 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 CDH8P55286 799 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 GOLGA8FQ08AF8 430 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 GOLGA8DPQ0D2H9 430 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 DNAJC3Q13217 504 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 DUOXA2Q1HG44 320 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 INAVAQ3KP66 663 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 PRAMEF14Q5SWL7 426 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 ARL6IP4Q66PJ3 421 aaKnown RBP10.2□□□□□ -0.78
IFT88-203ENST00000389373 LIMS2Q7Z4I7 341 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 GATAD2AQ86YP4 633 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 UCMAQ8WVF2 138 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 NAF1Q96HR8 494 aaKnown RBP10.2□□□□□ -0.78
IFT88-203ENST00000389373 AK8Q96MA6 479 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 CLMPQ9H6B4 373 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 C6orf106Q9H6K1 298 aaPredicted RBP10.2□□□□□ -0.78
IFT88-203ENST00000389373 TM9SF3Q9HD45 589 aa10.2□□□□□ -0.78
IFT88-203ENST00000389373 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
IFT88-203ENST00000389373 SMG1Q96Q15 3661 aaKnown RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 ATP8B3O60423 1300 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 CAPN8A6NHC0 703 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 SLC26A4O43511 780 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 TLR5O60602 858 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 LDOC1O95751 146 aaPredicted RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 CST3P01034 146 aaPredicted RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 EPHX1P07099 455 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 PGFP49763 221 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 TNNC1P63316 161 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 KCNC4Q03721 635 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 ARID5AQ03989 594 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 ZNF234Q14588 700 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 KCNT1Q5JUK3 1230 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 HES3Q5TGS1 186 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 USP49Q70CQ1 688 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 TRAPPC11Q7Z392 1133 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 GPD1LQ8N335 351 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 C1orf216Q8TAB5 229 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 IGSF8Q969P0 613 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 CNDP2Q96KP4 475 aaKnown RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 KLF16Q9BXK1 252 aaPredicted RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
IFT88-203ENST00000389373 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
IFT88-203ENST00000389373 ASH1LQ9NR48 2969 aaKnown RBP10.18□□□□□ -0.78
IFT88-203ENST00000389373 ZNF233A6NK53 670 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 MDM4O15151 490 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 PCDHGA12O60330 932 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 ABCB7O75027 752 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 TACC1O75410 805 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 RFPL3O75679 317 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 AP1G2O75843 785 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 PPP1R37O75864 691 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 ITGAVP06756 1048 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 IDEP14735 1019 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 PRKCHP24723 683 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 ACSL1P33121 698 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 ATP5C1P36542 298 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms