RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 RPL7AP62424 266 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TWF1Q12792 350 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MRPL28Q13084 256 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TMEM132DQ14C87 1099 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 DCAF4L1Q3SXM0 396 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CCDC153Q494R4 210 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF513Q8N8E2 541 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ASAP3Q8TDY4 903 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MTERF3Q96E29 417 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF333Q96JL9 665 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ATAD3AQ9NVI7 634 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KCNK4Q9NYG8 393 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 GPRC5DQ9NZD1 345 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ERVK-10P10266 1014 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RBP5P82980 135 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KRT72Q14CN4 511 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 IRGCQ6NXR0 463 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CES3Q6UWW8 571 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RRM2BQ7LG56 351 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MAGEE2Q8TD90 523 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FRMD8P1Q9BZ68 369 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NIF3L1Q9GZT8 377 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 LRMDAQ9H2I8 198 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CD274Q9NZQ7 290 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PCDHGB4Q9UN71 923 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ADCY6O43306 1168 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TPBGLP0DKB5 382 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CHRM3P20309 590 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PRKCIP41743 596 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PPP4CP60510 307 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RPL10AP62906 217 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MAPRE1Q15691 268 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SPOCD1Q6ZMY3 1216 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 GIPC3Q8TF64 312 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FAM167AQ96KS9 214 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TRPC5OSA6NMA1 111 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KPNA4O00629 521 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MGRN1O60291 552 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 LCA5LO95447 670 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 HSMCR30P0CW71 290 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ALDH1A3P47895 512 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CHN2P52757 468 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PLK1P53350 603 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PKNOX1P55347 436 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TKFCQ3LXA3 575 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TAGAPQ8N103 731 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ATPAF2Q8N5M1 289 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ART4Q93070 314 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SLC35C1Q96A29 364 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SH3GL1Q99961 368 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PLEKHA5Q9HAU0 1116 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 GALNT8Q9NY28 637 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 KIF13AQ9H1H9 1805 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 LAMA3Q16787 3333 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FAAP100Q0VG06 881 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ITPK1Q13572 414 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PDK3Q15120 406 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RGS21Q2M5E4 152 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NAPEPLDQ6IQ20 393 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SEPT12Q8IYM1 358 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ULK2Q8IYT8 1036 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CPB2Q96IY4 423 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NR1H4Q96RI1 486 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NAT9Q9BTE0 207 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SPON2Q9BUD6 331 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 TRIM54Q9BYV2 358 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SLC13A4Q9UKG4 626 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 ATP8B3O60423 1300 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FOLH1Q04609 750 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 BNIP1Q12981 228 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CCDC142Q17RM4 750 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 AGKQ53H12 422 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SGO1Q5FBB7 561 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 NANOGNBQ7Z5D8 188 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 CLNKQ7Z7G1 428 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FAM172AQ8WUF8 416 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 QTRT2Q9H974 415 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 IFNA8P32881 189 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 HMGCS2P54868 508 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FASTKD3Q14CZ7 662 aaKnown RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 EMC2Q15006 297 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 N4BP2L1Q5TBK1 243 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PTAR1Q7Z6K3 402 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 UNC45BQ8IWX7 931 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MYO1HQ8N1T3 1032 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 PARP8Q8N3A8 854 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 EPS8L1Q8TE68 723 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 DNAJC19Q96DA6 116 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 RNF145Q96MT1 663 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 MTMR9Q96QG7 549 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 DCLK3Q9C098 648 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 LATS2Q9NRM7 1088 aa4.31□□□□□ -1.72
BRCA2-201ENST00000380152 SRRM3A6NNA2 597 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-201ENST00000380152 FANCGO15287 622 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms