RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 PANX3Q96QZ0 392 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 STARD13Q9Y3M8 1113 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 MORC2Q9Y6X9 1032 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 SLIT1O75093 1534 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ADCY3O60266 1144 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 JCHAINP01591 159 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ALBP02768 609 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 JAK1P23458 1154 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 MAPK8P45983 427 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 NR2C2P49116 596 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 MRPL28Q13084 256 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ACVR2BQ13705 512 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 LONP2Q86WA8 852 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 FAM131BQ86XD5 332 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ENGASEQ8NFI3 743 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 PPP1R16AQ96I34 528 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 SYBUQ9NX95 663 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 HACD1B0YJ81 288 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 PCDH8O95206 1070 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 RARGP13631 454 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 KCNJ1P48048 391 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ERVK-24P63145 666 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ERMARDQ5T6L9 678 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 TAS1R2Q8TE23 839 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 STARD8Q92502 1023 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 PNKPQ96T60 521 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 ASCC2Q9H1I8 757 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
PHACTR4-202ENST00000373839 CNTNAP2Q9UHC6 1331 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PQBP1O60828 265 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CXCL8P10145 99 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 HOXA10P31260 410 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 HALP42357 657 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 GYS2P54840 703 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MPP3Q13368 585 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 TRPM8Q7Z2W7 1104 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 C10orf53Q8N6V4 93 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 ATP13A1Q9HD20 1204 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 ZC4H2Q9NQZ6 224 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MSRAQ9UJ68 235 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 RASSF9O75901 435 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PYGMP11217 842 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SHMT1P34896 483 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 NPY2RP49146 381 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CYTH1Q15438 398 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 METTL3Q86U44 580 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 FBXO36Q8NEA4 188 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 ACTRT1Q8TDG2 376 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 BHMTQ93088 406 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MCCC1Q96RQ3 725 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CASTOR2A6NHX0 329 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SLC15A5A6NIM6 579 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PRR23D1E9PI22 279 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 F8VZ95 297 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PRR23D2P0DMB1 279 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 RXRGP48443 463 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CHRNB3Q05901 458 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 FAM171A1Q5VUB5 890 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 DDX42Q86XP3 938 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 DNAJB3Q8WWF6 145 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CNDP1Q96KN2 507 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 THTPAQ9BU02 230 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 FTHL17Q9BXU8 183 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PCDH9Q9HC56 1237 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 NT5MQ9NPB1 228 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.584e-6■□□□□ 10.1
PHACTR4-202ENST00000373839 SNTG2Q9NY99 539 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 TRIM17Q9Y577 477 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 E9PCH4 1651 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PLSCR1O15162 318 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MPOP05164 745 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 EIF2S1P05198 315 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PDHA1P08559 390 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 RARRES1P49788 294 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 NAB1Q13506 487 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CYLC2Q14093 348 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SEZ6Q53EL9 994 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MAP1SQ66K74 1059 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CES5AQ6NT32 575 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 TTI2Q6NXR4 508 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 ARID3BQ8IVW6 561 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 TSPAN18Q96SJ8 248 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 ATXN3LQ9H3M9 355 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 GPAMQ9HCL2 828 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SHOC2Q9UQ13 582 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CPS1P31327 1500 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 H3BMM5 538 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 WNT10BO00744 389 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 OR56A5P0C7T3 313 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CSE1LP55060 971 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms