RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
CAPN9-203ENST00000366666 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 KLHL11Q9NVR0 708 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 FNIP2Q9P278 1114 aa12.77□□□□□ -0.37
CAPN9-203ENST00000366666 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 CARNS1A5YM72 827 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 RFXAPO00287 272 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 KCNK3O14649 394 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 OPA1O60313 960 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 SSR1P43307 286 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 PEX5P50542 639 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 ERVK-21P61565 698 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 CREG2Q8IUH2 290 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 NIPA2Q8N8Q9 360 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 PEBP4Q96S96 227 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 TBCBQ99426 244 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 PCSK1NQ9UHG2 260 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 MAGED2Q9UNF1 606 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 HSF2BPO75031 334 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 OBSL1O75147 1896 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 LTFP02788 710 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 HDAC4P56524 1084 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 SNX16P57768 344 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 SMARCB1Q12824 385 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 SMTNL2Q2TAL5 461 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 BSPRYQ5W0U4 402 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 TPGS2Q68CL5 300 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 ANKS1BQ7Z6G8 1248 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 FAM172AQ8WUF8 416 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 TACO1Q9BSH4 297 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 POPDC2Q9HBU9 364 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 NGRNQ9NPE2 291 aaKnown RBP12.76□□□□□ -0.37
CAPN9-203ENST00000366666 GOLGA6AQ9NYA3 693 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 GMIPQ9P107 970 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
CAPN9-203ENST00000366666 A0A087WUV0 522 aaPredicted RBP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 A0A1W2PQH9 124 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 PER2O15055 1255 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 FBXO21O94952 628 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 PYGMP11217 842 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 NCAM1P13591 858 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 TNFRSF8P28908 595 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 MIPP30301 263 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SDC4P31431 198 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SCNN1AP37088 669 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 MATKP42679 507 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 GPM6BQ13491 265 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 GDPD5Q8WTR4 605 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SLC2A13Q96QE2 648 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SH3GL2Q99962 352 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 DDX23Q9BUQ8 820 aaKnown RBP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 TMPRSS4Q9NRS4 437 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAPN9-203ENST00000366666 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 PCDHA3Q9Y5H8 950 aa12.75□□□□□ -0.37
CAPN9-203ENST00000366666 SYNJ2BP-COX16A0A087WUM0 186 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 H3BNC9 293 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 PRRG1O14668 218 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 FSCN2O14926 492 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 DAB1O75553 588 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 MYBL2P10244 700 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 KLRC2P26717 231 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 MAN1A1P33908 653 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 SATB1Q01826 763 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 TWF1Q12792 350 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 TAF10Q12962 218 aa12.74□□□□□ -0.37
CAPN9-203ENST00000366666 GLE1Q53GS7 698 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms