RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GPR142Q7Z601 462 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 SLC26A11Q86WA9 606 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 TREML1Q86YW5 311 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 POU5F2Q8N7G0 328 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 CHST13Q8NET6 341 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 APOL6Q9BWW8 343 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 MAGEB5Q9BZ81 275 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 RSAD1Q9HA92 442 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 COL11A1P12107 1806 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 LMNAP02545 664 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 HOXC6P09630 235 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 SKIP12755 728 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 UNC5BQ8IZJ1 945 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 XYLT2Q9H1B5 865 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 SLC17A6Q9P2U8 582 aa15.02□□□□□ -0.01
SFSWAP-201ENST00000261674 MAP3K13O43283 966 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 GRIA1P42261 906 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 MCCD1P59942 119 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 RBM15BQ8NDT2 890 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TEKT4Q8WW24 435 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 CCDC124Q96CT7 223 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 ELOVL4Q9GZR5 314 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 LNPEPQ9UIQ6 1025 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TMEM88BA6NKF7 163 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 MAP3K7O43318 606 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 USP1O94782 785 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 PIGRP01833 764 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TXNP10599 105 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 STIP1P31948 543 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 CCNG1P51959 295 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 EPHB1P54762 984 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 SLC34A1Q06495 639 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TTC39BQ5VTQ0 682 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 C1orf146Q5VVC0 180 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 C7orf31Q8N865 590 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 PTCD3Q96EY7 689 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 ZNF333Q96JL9 665 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TMEM134Q9H6X4 195 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 FAM49BQ9NUQ9 324 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 OTOFQ9HC10 1997 aa15.01□□□□□ -0.01
SFSWAP-201ENST00000261674 TRAFD1O14545 582 aaPredicted RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 ETV4P43268 484 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 EFNA5P52803 228 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 MRPS35P82673 323 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 UBAP2LQ14157 1087 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 CCDC142Q17RM4 750 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 LGSNQ5TDP6 509 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 FAM160B1Q5W0V3 765 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ZPBP2Q6X784 338 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 CRLF3Q8IUI8 442 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 EFCAB3Q8N7B9 438 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ENDOVQ8N8Q3 282 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 NIPA2Q8N8Q9 360 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SEPT1Q8WYJ6 367 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 EBF4Q9BQW3 602 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 TUBB6Q9BUF5 446 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 CEP41Q9BYV8 373 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SCOCQ9UIL1 159 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 PCDHGC3Q9UN70 934 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 TEX264Q9Y6I9 313 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 E7ESA3 106 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 CIB2O75838 187 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 AP3M2P53677 418 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 OAZ1P54368 228 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 TFDP2Q14188 446 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ZRSR2Q15696 482 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 C6orf163Q5TEZ5 329 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ARMCX2Q7L311 632 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SCUBE3Q8IX30 993 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 UBR7Q8N806 425 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SLC4A11Q8NBS3 891 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 CMASQ8NFW8 434 aaPredicted RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 NPLOC4Q8TAT6 608 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ZNF398Q8TD17 642 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SKA1Q96BD8 255 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 PARK7Q99497 189 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 VCXQ9H320 206 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 MINDY3Q9H8M7 445 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 IL1RAPL1Q9NZN1 696 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 PCDH10Q9P2E7 1040 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 DOCK3Q8IZD9 2030 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 SYNJ2BP-COX16A0A087WUM0 186 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 LYPLA1O75608 230 aaPredicted RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 GNAT1P11488 350 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 GMPRP36959 345 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 YWHAZP63104 245 aaKnown RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 RSPH3Q86UC2 560 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 MPP5Q8N3R9 675 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 C1orf127Q8N9H9 656 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 ZNF483Q8TF39 744 aaPredicted RBP15□□□□□ -0.01
SFSWAP-201ENST00000261674 CPB2Q96IY4 423 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 DHRS4Q9BTZ2 278 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 COX16Q9P0S2 106 aa15□□□□□ -0.01
SFSWAP-201ENST00000261674 LOC100653049A0A140TA62 436 aa14.99□□□□□ -0.01
SFSWAP-201ENST00000261674 A6NHS1 94 aa14.99□□□□□ -0.01
SFSWAP-201ENST00000261674 LACTBL1A8MY62 500 aa14.99□□□□□ -0.01
SFSWAP-201ENST00000261674 PRR5-ARHGAP8B1AHC4 643 aa14.99□□□□□ -0.01
SFSWAP-201ENST00000261674 E7ENQ6 273 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms