RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 C17orf75Q9HAS0 396 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MRPL39Q9NYK5 338 aaKnown RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 ATP12AP54707 1039 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 RBM43Q6ZSC3 357 aaKnown RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 GIPC3Q8TF64 312 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MBOAT7Q96N66 472 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 OSBPL10Q9BXB5 764 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 RMI1Q9H9A7 625 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 FBXO6Q9NRD1 293 aaPredicted RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 SCN3BQ9NY72 215 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 WHRNQ9P202 907 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 CNTNAP2Q9UHC6 1331 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 SERPINB9P50453 376 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 ATF7IP2Q5U623 682 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 RNF219Q5W0B1 726 aaPredicted RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 KLHL17Q6TDP4 642 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 GSTCDQ8NEC7 633 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 ACER1Q8TDN7 264 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 ILKAPQ9H0C8 392 aaPredicted RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 FAM96AQ9H5X1 160 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 TBC1D22BQ9NU19 505 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 BFSP2Q13515 415 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MTX3Q5HYI7 312 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 RRM2BQ7LG56 351 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 SRPK1Q96SB4 655 aaKnown RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 TMEM8AQ9HCN3 771 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 STAP1Q9ULZ2 295 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 TET3O43151 1660 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 IQCMA0A1B0GVH7 501 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 CCNA1P78396 465 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MMRN1Q13201 1228 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 NR1D2Q14995 579 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 CBWD6Q4V339 395 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 CBWD3Q5JTY5 395 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 CBWD5Q5RIA9 395 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 PKN3Q6P5Z2 889 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 EPB41L1Q9H4G0 881 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MRPL40Q9NQ50 206 aaKnown RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 GRID1Q9ULK0 1009 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 PNPLA7Q6ZV29 1317 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 MYO1DO94832 1006 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 POLBP06746 335 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 B3GALNT2Q8NCR0 500 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 SPRTNQ9H040 489 aaPredicted RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 QTRT2Q9H974 415 aaKnown RBP7.74□□□□□ -1.17
RIF1-201ENST00000243326 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
RIF1-201ENST00000243326 RRP1BQ14684 758 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 APPL2Q8NEU8 664 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 COA1Q9GZY4 146 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PNPOQ9NVS9 261 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 SPTBN1Q01082 2364 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 ANKRD63C9JTQ0 380 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CPA3P15088 417 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CXCR3P49682 368 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PTENP60484 403 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 AP5B1Q2VPB7 878 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TYW3Q6IPR3 259 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 GALNT5Q7Z7M9 940 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CEP250Q9BV73 2442 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ALOX15P16050 662 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 CDK17Q00537 523 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 KRT76Q01546 638 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 LNX1Q8TBB1 728 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 DNAJC18Q9H819 358 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 MARCH7Q9H992 704 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 XPNPEP3Q9NQH7 507 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ALDH1A3P47895 512 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 VAC14Q08AM6 782 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ITGB3BPQ13352 177 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 SEL1L3Q68CR1 1132 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 P3H2Q8IVL5 708 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 NSMCE4AQ9NXX6 385 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CACNA1CQ13936 2221 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ASNA1O43681 348 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ZNF862O60290 1169 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 JCHAINP01591 159 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 GSTM1P09488 218 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 AMPD1P23109 780 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TWF1Q12792 350 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 SURF1Q15526 300 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 DENND1BQ6P3S1 775 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 ZNF614Q8N883 585 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 NACC2Q96BF6 587 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CCDC167Q9P0B6 97 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PDZK1P1A8MUH7 402 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 BBOX1O75936 387 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 SERPINB8P50452 374 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 SCFD2Q8WU76 684 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PPP2R3CQ969Q6 453 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 RAD18Q9NS91 495 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 REXO2Q9Y3B8 237 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 PSTPIP1O43586 416 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PIGHQ14442 188 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 TFAP2DQ7Z6R9 452 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TXNRD3Q86VQ6 643 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 C10orf53Q8N6V4 93 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms