RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 BFSP2Q13515 415 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 DAB2IPQ5VWQ8 1189 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 IER5Q5VY09 327 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 DSTYKQ6XUX3 929 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 RSPH3Q86UC2 560 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 RHPN2Q8IUC4 686 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 NME8Q8N427 588 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 TCP10LQ8TDR4 215 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 ARL8BQ9NVJ2 186 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 WDR35Q9P2L0 1181 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.36■■□□□ 1.01
SNX3-201ENST00000230085 PITPNM1O00562 1244 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 CHRNA1P02708 482 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 GNA15P30679 374 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 PEX19P40855 299 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 ARFIP2P53365 341 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 CCL23P55773 120 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 ZNF252P-AS1Q0IIN9 211 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 RFWD2Q8NHY2 731 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 PYROXD1Q8WU10 500 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 NRG4Q8WWG1 115 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 BSNDQ8WZ55 320 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 APOPT1Q96IL0 206 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 PI4K2AQ9BTU6 479 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 CDHR5Q9HBB8 845 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 PNPLA8Q9NP80 782 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 MKS1Q9NXB0 559 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 HEY2Q9UBP5 337 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 GINS2Q9Y248 185 aa21.36■■□□□ 1.01
SNX3-201ENST00000230085 GYG2O15488 501 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 RAG1P15918 1043 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 ARL2P36404 184 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 NLRP11P59045 1033 aaKnown RBP21.35■■□□□ 1.01
SNX3-201ENST00000230085 RCN1Q15293 331 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 TBCCQ15814 346 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 KIZQ2M2Z5 673 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 TDRD10Q5VZ19 366 aaKnown RBP21.35■■□□□ 1.01
SNX3-201ENST00000230085 RFWD3Q6PCD5 774 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 TRAF7Q6Q0C0 670 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 PPFIBP2Q8ND30 876 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 RAB3IL1Q8TBN0 382 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 CPT1BQ92523 772 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 POLR3FQ9H1D9 316 aaPredicted RBP21.35■■□□□ 1.01
SNX3-201ENST00000230085 TAS2R1Q9NYW7 299 aa21.35■■□□□ 1.01
SNX3-201ENST00000230085 IQANK1A0A1B0GTG1 560 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 C3orf70A6NLC5 250 aaPredicted RBP21.34■■□□□ 1.01
SNX3-201ENST00000230085 SMIM24O75264 130 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 GPR32O75388 356 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 VNN1O95497 513 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 TIMP1P01033 207 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 ZSCAN5DPP0CG00 497 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 TUBP50607 506 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 SEPT7Q16181 437 aaKnown RBP21.34■■□□□ 1.01
SNX3-201ENST00000230085 CCDC6Q16204 474 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 LLGL2Q6P1M3 1020 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 BBS12Q6ZW61 710 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 ADGRG6Q86SQ4 1221 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 TRIM42Q8IWZ5 723 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 SCG3Q8WXD2 468 aaKnown RBP21.34■■□□□ 1.01
SNX3-201ENST00000230085 BICD1Q96G01 975 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 SCLYQ96I15 445 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 CYTH2Q99418 400 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 KCNK4Q9NYG8 393 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 STRIP2Q9ULQ0 834 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 CDY2AQ9Y6F7 541 aa21.34■■□□□ 1.01
SNX3-201ENST00000230085 ENO4A6NNW6 628 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 HNRNPDLO14979 420 aaKnown RBP21.33■■□□□ 1.01
SNX3-201ENST00000230085 TBX10O75333 385 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 CSDE1O75534 798 aaKnown RBP21.33■■□□□ 1.01
SNX3-201ENST00000230085 IQCF3P0C7M6 154 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 KRT10P13645 584 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 SELPP16109 830 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 RAB27AP51159 221 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 MRPS6P82932 125 aaKnown RBP21.33■■□□□ 1.01
SNX3-201ENST00000230085 MGAT3Q09327 533 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 LAMTOR4Q0VGL1 99 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 LRRC8DQ7L1W4 858 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 TAS1R3Q7RTX0 852 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 NET1Q7Z628 596 aaPredicted RBP21.33■■□□□ 1.01
SNX3-201ENST00000230085 FNIP1Q8TF40 1166 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 NLRP4Q96MN2 994 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 C7orf26Q96N11 449 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 FAM118BQ9BPY3 351 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.33■■□□□ 1.016e-6■■■■■ 48.1
SNX3-201ENST00000230085 ANGPTL2Q9UKU9 493 aa21.33■■□□□ 1.01
SNX3-201ENST00000230085 CAPN14A8MX76 684 aa21.33■■□□□ 1
SNX3-201ENST00000230085 H0Y3Z8 333 aa21.33■■□□□ 1
SNX3-201ENST00000230085 RPLP2P05387 115 aaKnown RBP21.33■■□□□ 1
SNX3-201ENST00000230085 SRGAP2CP0DJJ0 459 aa21.33■■□□□ 1
SNX3-201ENST00000230085 PIK3CAP42336 1068 aa21.33■■□□□ 1
SNX3-201ENST00000230085 TFDP1Q14186 410 aa21.33■■□□□ 1
SNX3-201ENST00000230085 TMPRSS6Q8IU80 811 aa21.33■■□□□ 1
SNX3-201ENST00000230085 ARHGAP18Q8N392 663 aa21.33■■□□□ 1
SNX3-201ENST00000230085 SLC44A1Q8WWI5 657 aa21.33■■□□□ 1
SNX3-201ENST00000230085 ZNF184Q99676 751 aaPredicted RBP21.33■■□□□ 1
SNX3-201ENST00000230085 WDR83Q9BRX9 315 aaKnown RBP21.33■■□□□ 1
SNX3-201ENST00000230085 FRMD8Q9BZ67 464 aaPredicted RBP21.33■■□□□ 1
SNX3-201ENST00000230085 ADAMTS10Q9H324 1103 aa21.33■■□□□ 1
SNX3-201ENST00000230085 GPAMQ9HCL2 828 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms