RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 FAM192AQ9GZU8 254 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 AFG3L2Q9Y4W6 797 aa9.76□□□□□ -0.85
HLA-DOA-201ENST00000229829 COL4A6Q14031 1691 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SIGLEC16A6NMB1 481 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRAFD1O14545 582 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 LSM1O15116 133 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 CAPN15O75808 1086 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 KRT19P08727 400 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MIPP30301 263 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SFSWAPQ12872 951 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PTK7Q13308 1070 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 DUOXA2Q1HG44 320 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MMEL1Q495T6 779 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAXCQ5TGI0 409 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 IYDQ6PHW0 289 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 RBM44Q6ZP01 1051 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PCGF5Q86SE9 256 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SPATA18Q8TC71 538 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PYDC1Q8WXC3 89 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDHR1Q96JP9 859 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIM56Q9BRZ2 755 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 GRIP2Q9C0E4 1043 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 EBF3Q9H4W6 596 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ACAD9Q9H845 621 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 CYP4F11Q9HBI6 524 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MYOCOSA0A1B0GUC4 107 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MT-ND3P03897 115 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 HOXC6P09630 235 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PTPRAP18433 802 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDH5P33151 784 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ETV4P43268 484 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 LPCAT4Q643R3 524 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 CIAPIN1Q6FI81 312 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 RINLQ6ZS11 566 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 POLNQ7Z5Q5 900 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 RILPQ96NA2 401 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 NR1H4Q96RI1 486 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 WRNIP1Q96S55 665 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PEBP4Q96S96 227 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MECRQ9BV79 373 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMEM120AQ9BXJ8 343 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MIS12Q9H081 205 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SDCBP2Q9H190 292 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 VPS11Q9H270 941 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPARGC1AQ9UBK2 798 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 HACL1Q9UJ83 578 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 COMMD3-BMI1R4GMX3 469 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAM237BA0A1B0GVD1 139 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIM43BA6NCK2 446 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 B4GALT5O43286 388 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 RNASEH1O60930 286 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TOM1L1O75674 476 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ALOX15P16050 662 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 MLH1P40692 756 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PSMD7P51665 324 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ARFIP2P53365 341 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 YWHAGP61981 247 aaKnown RBP eCLIP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TARBP2Q15633 366 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 STXBP2Q15833 593 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 KLHL38Q2WGJ6 581 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SH2D5Q6ZV89 423 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 XYLT1Q86Y38 959 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 RNF149Q8NC42 400 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 PIWIL1Q96J94 861 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ACO2Q99798 780 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SYT17Q9BSW7 474 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TEX13BQ9BXU2 312 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 NIFKQ9BYG3 293 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIM55Q9BYV6 548 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF518BQ9C0D4 1074 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMEM134Q9H6X4 195 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 TLE6Q9H808 572 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 SSU72Q9NP77 194 aaKnown RBP9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ANLNQ9NQW6 1124 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 APPL1Q9UKG1 709 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 ADAMTS5Q9UNA0 930 aa9.75□□□□□ -0.85
HLA-DOA-201ENST00000229829 GSC2O15499 205 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 DLDP09622 509 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 ATXN3P54252 364 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIP10Q15642 601 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPP1R2P3Q6NXS1 205 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 ENDOVQ8N8Q3 282 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 FBXO27Q8NI29 283 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 PTCD3Q96EY7 689 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 R3HDMLQ9H3Y0 253 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CPSF3Q9UKF6 684 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 LCTP09848 1927 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CXorf49A8MYA2 514 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TM9SF1O15321 606 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 UGT1A9O60656 530 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 GRAP2O75791 330 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 KRT7P08729 469 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDK7P50613 346 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms