RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Cpne3Q8BT60 533 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rccd1Q8BTU7 377 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Unc45aQ99KD5 944 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rnf181Q9CY62 165 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Stk4Q9JI11 487 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Olfr271-ps1A0A1L1SQH2 283 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 A930018M24RikB7ZMY3 218 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Hes2O54792 157 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Nr3c1P06537 783 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 ProcP33587 460 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rnaseh2bQ80ZV0 308 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Thap3Q8BJ25 218 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ndel1Q9ERR1 345 aa12.49□□□□□ -0.41
Col8a1-201ENSMUST00000089332 RerglB2RVE2 204 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Klc1O88447 541 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ccna2P51943 422 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Smarcd1Q61466 515 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Prrg3Q6PAQ9 231 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Btnl9Q8BJE2 536 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sbk1Q8QZX0 417 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Vps11Q91W86 941 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tada1Q99LM9 335 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ppp1r3aQ99MR9 1089 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Serbp1Q9CY58 407 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Hspa12bQ9CZJ2 685 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 PudpQ9D5U5 234 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Kcnq2Q9Z351 759 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm5737A0A140LI11 423 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Zfp780bE9Q2S6 806 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Klhl33G3UW92 533 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Csn1s1P19228 313 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 TfamP40630 243 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rpl36P47964 105 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Slc24a2Q14BI1 711 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Zfp607aQ3TQG9 686 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Arhgap44Q5SSM3 814 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Catsper3Q80W99 395 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tdrd7Q8K1H1 1086 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 ZwilchQ8R060 589 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tssk3Q9D2E1 268 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mgea5Q9EQQ9 916 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ruvbl2Q9WTM5 463 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 1700031M16RikA0A087WSH0 82 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Skint11A7XV14 364 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rrn3B2RS91 656 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ifit3bE9PV48 403 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Zfp277E9Q6D6 583 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pcdh9F8VPK8 1237 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 PtgisO35074 501 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Surf2P09926 257 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Msh3P13705 1091 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mov10P23249 1004 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Hspa9P38647 679 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sox10Q04888 466 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tnfaip2Q61333 691 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Cops7bQ8BV13 264 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rpp40Q8R1F9 363 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Olfr1352Q8VGX5 309 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Duoxa2Q9D311 320 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pik3c2bE9QAN8 1632 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Smim10l2aA0A0B4J1F8 78 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Prdm12A2AJ77 365 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Bpifb9bA2AJD1 591 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 IdsQ08890 552 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Magee1Q6PCZ4 918 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 SyncripQ7TMK9 623 aaKnown RBP12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Bpifb9aQ80XI7 591 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rmnd5aQ80YQ8 391 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 HibchQ8QZS1 385 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Usp26Q99MX1 835 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sfmbt1Q9JMD1 863 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 AdgbG3UZ78 1657 aa12.48□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ppp1r36D3Z0R2 411 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Cyp2j6O54750 501 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Il13ra2O88786 383 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Krt6aP50446 553 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 CamkvQ3UHL1 512 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Lrrc47Q505F5 581 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Exoc3l4Q6DIA2 721 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Dna2Q6ZQJ5 1062 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Plppr4Q7TME0 766 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rbm22Q8BHS3 420 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 RadxQ8C779 850 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Usp27Q8CEG8 438 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Col23a1Q8K4G2 532 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Exd2Q8VEG4 650 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Oas1cQ924S2 362 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Nme5Q99MH5 211 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Syf2Q9D198 242 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gtf3c6Q9D8P7 227 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Dyrk1bQ9Z188 629 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pitpnm2Q6ZPQ6 1335 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm4869A0A1B0GSG7 984 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Birc5O70201 140 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gsta3P30115 221 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 YwhazP63101 245 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 NogP97466 232 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Cyp2c65Q148B1 490 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pitpnm3Q3UHE1 974 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 McuQ3UMR5 350 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms