RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 O00370 1275 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 XPO1O14980 1071 aaKnown RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 MDM4O15151 490 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 KAT7O95251 611 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PAEPP09466 180 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 RALAP11233 206 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 VDRP11473 427 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PLA2G4AP47712 749 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PXNP49023 591 aaPredicted RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 BCAT1P54687 386 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PDE4CQ08493 712 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 CETN1Q12798 172 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 DMC1Q14565 340 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 LPAL2Q16609 132 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PRR23BQ6ZRT6 265 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 PHTF2Q8N3S3 785 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 GAB3Q8WWW8 586 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 HHIPQ96QV1 700 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 ARHGEF4Q9NR80 690 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 HESX1Q9UBX0 185 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 RWDD2AQ9UIY3 292 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
SNX20-205ENST00000610485 NUDT5Q9UKK9 219 aa13.55□□□□□ -0.24
SNX20-205ENST00000610485 ANTXRLA6NF34 631 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 TULP2O00295 520 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 APBB3O95704 486 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 AFPP02771 609 aaKnown RBP13.54□□□□□ -0.24
SNX20-205ENST00000610485 APODP05090 189 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 RETP07949 1114 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 CD19P15391 556 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 TGM1P22735 817 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 GRIA2P42262 883 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 TKTL1P51854 596 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 SEC13P55735 322 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 MRPS21P82921 87 aaKnown RBP13.54□□□□□ -0.24
SNX20-205ENST00000610485 GCNT1Q02742 428 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 BST2Q10589 180 aaKnown RBP13.54□□□□□ -0.24
SNX20-205ENST00000610485 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 CAMK4Q16566 473 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 PKDCCQ504Y2 493 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 PM20D1Q6GTS8 502 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 LCLAT1Q6UWP7 414 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 Q6ZNB5 142 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 BHLHA9Q7RTU4 235 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 PPM1KQ8N3J5 372 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 KAT5Q92993 513 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 EBF1Q9UH73 591 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
SNX20-205ENST00000610485 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX20-205ENST00000610485 KIAA1549LQ6ZVL6 1849 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 MYO16Q9Y6X6 1858 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 AXIN1O15169 862 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 LRP3O75074 770 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 TULP3O75386 442 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 RPP40O75818 363 aaKnown RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 STC2O76061 302 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 ZBED1O96006 694 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 CCDC192P0DO97 292 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 TNFRSF4P43489 277 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 KIR2DL1P43626 348 aaPredicted RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 ID4P47928 161 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 ZNF132P52740 706 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNX20-205ENST00000610485 KDSRQ06136 332 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 HSF5Q4G112 596 aaPredicted RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 CEP68Q76N32 757 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 ARHGEF19Q8IW93 802 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 FAM160A2Q8N612 972 aaPredicted RBP13.53□□□□□ -0.24
SNX20-205ENST00000610485 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 MED15Q96RN5 788 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 ULBP1Q9BZM6 244 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 DEC1Q9P2X7 70 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 GVINP1Q7Z2Y8 2422 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 ZNF292O60281 2723 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 FRYLO94915 3013 aa13.53□□□□□ -0.24
SNX20-205ENST00000610485 RNF225M0QZC1 329 aaPredicted RBP13.52□□□□□ -0.25
SNX20-205ENST00000610485 CACNG3O60359 315 aa13.52□□□□□ -0.25
SNX20-205ENST00000610485 KLKB1P03952 638 aa13.52□□□□□ -0.25
SNX20-205ENST00000610485 COG7P83436 770 aa13.52□□□□□ -0.25
SNX20-205ENST00000610485 STILQ15468 1287 aa13.52□□□□□ -0.25
SNX20-205ENST00000610485 CNGA2Q16280 664 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms