RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DAOAP59103 153 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 ZBED6P86452 979 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 BTBD8Q5XKL5 378 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 KLHDC10Q6PID8 442 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 SCD5Q86SK9 330 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTSA-211ENST00000606066 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 USP13Q92995 863 aaPredicted RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 SLC22A12Q96S37 553 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 RPP25Q9BUL9 199 aaKnown RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 TRMT61BQ9BVS5 477 aaKnown RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 SMG9Q9H0W8 520 aaKnown RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 NMUR1Q9HB89 426 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 ABCC13Q9NSE7 274 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 FAM86C1Q9NVL1 165 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTSA-211ENST00000606066 CAPN11Q9UMQ6 739 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 DUSP12Q9UNI6 340 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 LUC7L2Q9Y383 392 aaKnown RBP14.97□□□□□ -0.01
CTSA-211ENST00000606066 SPTBN4Q9H254 2564 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 NOTCH4Q99466 2003 aa14.97□□□□□ -0.01
CTSA-211ENST00000606066 VPS13AQ96RL7 3174 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 E5RJQ4 531 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 PIK3R2O00459 728 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 PRAMEF12O95522 483 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 SRFP11831 508 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 TCF3P15923 654 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 NBL1P41271 181 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CLCN5P51795 746 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 PFKPQ01813 784 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 GOLGA8FQ08AF8 430 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 GOLGA8DPQ0D2H9 430 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 BSPRYQ5W0U4 402 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CC2D1AQ6P1N0 951 aaPredicted RBP14.96□□□□□ -0.01
CTSA-211ENST00000606066 VITQ6UXI7 678 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 RSRC2Q7L4I2 434 aaKnown RBP14.96□□□□□ -0.01
CTSA-211ENST00000606066 IRF2BP2Q7Z5L9 587 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 ZDHHC17Q8IUH5 632 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 GPIHBP1Q8IV16 184 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 VSTM4Q8IW00 320 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 SCUBE3Q8IX30 993 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 RNF139Q8WU17 664 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CPLX3Q8WVH0 158 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
CTSA-211ENST00000606066 AGPAT1Q99943 283 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 PLA2G2FQ9BZM2 168 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 OLA1Q9NTK5 396 aaKnown RBP14.96□□□□□ -0.01
CTSA-211ENST00000606066 OSER1Q9NX31 292 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CYTH4Q9UIA0 394 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 CPQQ9Y646 472 aa14.96□□□□□ -0.01
CTSA-211ENST00000606066 BZW2Q9Y6E2 419 aaKnown RBP14.96□□□□□ -0.01
CTSA-211ENST00000606066 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 E7ENQ6 273 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 ZNF263O14978 683 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 GABBR2O75899 941 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 PGFP49763 221 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 FMO1Q01740 532 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 FCHO2Q0JRZ9 810 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 C10orf120Q5SQS8 335 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
CTSA-211ENST00000606066 PPP1R2P3Q6NXS1 205 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 KIAA1958Q8N8K9 716 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 TMEM105Q8N8V8 129 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 SH3RF2Q8TEC5 729 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 IRF7Q92985 503 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 C18orf8Q96DM3 657 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 CPXM1Q96SM3 734 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 SLC2A4RGQ9NR83 387 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 SEPT11Q9NVA2 429 aaKnown RBP14.95□□□□□ -0.02
CTSA-211ENST00000606066 STRIP2Q9ULQ0 834 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 CCL26Q9Y258 94 aa14.95□□□□□ -0.02
CTSA-211ENST00000606066 LEFTY2O00292 366 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 CHADO15335 359 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 PAPSS1O43252 624 aaPredicted RBP14.94□□□□□ -0.02
CTSA-211ENST00000606066 TBX18O95935 607 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 LTFP02788 710 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 CYP1A1P04798 512 aaPredicted RBP14.94□□□□□ -0.02
CTSA-211ENST00000606066 GYPCP04921 128 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 GLI1P08151 1106 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 CHRNB2P17787 502 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 GDI1P31150 447 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 CASP14P31944 242 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 PRKCIP41743 596 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 NOMO3P69849 1222 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 GPC5P78333 572 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 COG7P83436 770 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 KLHL30Q0D2K2 578 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 GRM2Q14416 872 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 MTF1Q14872 753 aa14.94□□□□□ -0.02
CTSA-211ENST00000606066 TSR1Q2NL82 804 aaKnown RBP14.94□□□□□ -0.02
CTSA-211ENST00000606066 PTPN20Q4JDL3 420 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms