RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 SNX13Q9Y5W8 968 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 MBD3L4A6NDZ8 208 aaPredicted RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 MBD3L3A6NE82 208 aaPredicted RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 GOLIM4O00461 696 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 FYB1O15117 783 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 MGEA5O60502 916 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 BCAR3O75815 825 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 U2AF1L5P0DN76 240 aaPredicted RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 TXNP10599 105 aaKnown RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 CARSP49589 748 aaKnown RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 U2AF1Q01081 240 aaKnown RBP eCLIP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 SLC14A1Q13336 389 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 KCNB1Q14721 858 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 PLAG1Q6DJT9 500 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 NXNQ6DKJ4 435 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 USP49Q70CQ1 688 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 RAB11FIP4Q86YS3 637 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 YAF2Q8IY57 180 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 C16orf71Q8IYS4 520 aaPredicted RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 NRACQ8N912 160 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 ZC3H10Q96K80 434 aaKnown RBP2.99□□□□□ -1.93
ZNF404-202ENST00000587539 FAM118BQ9BPY3 351 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 RIMKLBQ9ULI2 386 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 HPSEQ9Y251 543 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 SLC27A6Q9Y2P4 619 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 AFG3L2Q9Y4W6 797 aa2.99□□□□□ -1.93
ZNF404-202ENST00000587539 CCP110O43303 1012 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 PLCD1P51178 756 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 GHRHRQ02643 423 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 GALEQ14376 348 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 POLD3Q15054 466 aaPredicted RBP2.98□□□□□ -1.93
ZNF404-202ENST00000587539 KRTAP27-1Q3LI81 207 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 PXDC1Q5TGL8 231 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 MANEALQ5VSG8 457 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 KLHDC7AQ5VTJ3 777 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 ZNF813Q6ZN06 617 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 P3H2Q8IVL5 708 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 FSTL5Q8N475 847 aaPredicted RBP2.98□□□□□ -1.93
ZNF404-202ENST00000587539 FAM71DQ8N9W8 422 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 MAP4K1Q92918 833 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 LRRC46Q96FV0 321 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 GJB4Q9NTQ9 266 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 MTMR4Q9NYA4 1195 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 DKK4Q9UBT3 224 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 ZNF212Q9UDV6 495 aa2.98□□□□□ -1.93
ZNF404-202ENST00000587539 GOLGA6CA6NDK9 693 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 GOLGA6BA6NDN3 693 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TMPRSS11DO60235 418 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 SNX2O60749 519 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 PRAMEF2O60811 474 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 RNF8O76064 485 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 MT-ND5P03915 603 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 A1BGP04217 495 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 GOLGA6DP0CG33 693 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 ATF7P17544 494 aaPredicted RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 ATF3P18847 181 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 NR4A2P43354 598 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 CCT4P50991 539 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TIAL1Q01085 375 aaKnown RBP eCLIP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 KPNB1Q14974 876 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 LARS2Q15031 903 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 RBMS2Q15434 407 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TRIM71Q2Q1W2 868 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TMTC4Q5T4D3 741 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 AWAT2Q6E213 333 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 GRHL2Q6ISB3 625 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 RNF44Q7L0R7 432 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 IRF2BP2Q7Z5L9 587 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TECPR1Q7Z6L1 1165 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 LIX1LQ8IVB5 337 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 TTC8Q8TAM2 541 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 SMCR8Q8TEV9 937 aaPredicted RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 PNISRQ8TF01 805 aaKnown RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 SNX22Q96L94 193 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 FOXP1Q9H334 677 aaPredicted RBP2.97□□□□□ -1.93
ZNF404-202ENST00000587539 OBP2AQ9NY56 170 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 GOLGA6AQ9NYA3 693 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 DNAJB11Q9UBS4 358 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 PCDHB2Q9Y5E7 798 aa2.97□□□□□ -1.93
ZNF404-202ENST00000587539 BTBD19C9JJ37 291 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 E5RJQ4 531 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 ZBED1O96006 694 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 PRF1P14222 555 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 RHCEP18577 417 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 EIF4A1P60842 406 aaKnown RBP2.96□□□□□ -1.93
ZNF404-202ENST00000587539 GPC5P78333 572 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 RHDQ02161 417 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 FHL1Q13642 323 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 GFOD2Q3B7J2 385 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 MEX3CQ5U5Q3 659 aaKnown RBP2.96□□□□□ -1.93
ZNF404-202ENST00000587539 DENND2CQ68D51 928 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 CHST15Q7LFX5 561 aaPredicted RBP2.96□□□□□ -1.93
ZNF404-202ENST00000587539 FMNL3Q8IVF7 1028 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 C12orf76Q8N812 135 aaPredicted RBP2.96□□□□□ -1.93
ZNF404-202ENST00000587539 CUL5Q93034 780 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 VPS50Q96JG6 964 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 SCNM1Q9BWG6 230 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 FAM50BQ9Y247 325 aa2.96□□□□□ -1.93
ZNF404-202ENST00000587539 AQP7P3A6NL99 342 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms