RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CFAP45Q9UL16 551 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
MKS1-209ENST00000580127 LAMA1P25391 3075 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.91■□□□□ 0.62
MKS1-209ENST00000580127 H0Y626 953 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 IKBKBO14920 756 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 OPHN1O60890 802 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 NDUFS2O75306 463 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 KIF20AO95235 890 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 TRIM16O95361 564 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 C4BPAP04003 597 aaKnown RBP18.91■□□□□ 0.62
MKS1-209ENST00000580127 ITPKAP23677 461 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 MESP2Q0VG99 397 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 SYCP2LQ5T4T6 812 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 PAQR9Q6ZVX9 377 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 SLC9A9Q8IVB4 645 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 FUKQ8N0W3 1084 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 PHTF2Q8N3S3 785 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 ZFRQ96KR1 1074 aaKnown RBP18.91■□□□□ 0.62
MKS1-209ENST00000580127 SCNM1Q9BWG6 230 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 GTPBP2Q9BX10 602 aaKnown RBP18.91■□□□□ 0.62
MKS1-209ENST00000580127 IMPG2Q9BZV3 1241 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 FAM124BQ9H5Z6 455 aaPredicted RBP18.91■□□□□ 0.62
MKS1-209ENST00000580127 TMEM74BQ9NUR3 256 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 CEP192Q8TEP8 1941 aa18.91■□□□□ 0.62
MKS1-209ENST00000580127 PLXND1Q9Y4D7 1925 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 ANTXRLA6NF34 631 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 C1QTNF9BB2RNN3 333 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
MKS1-209ENST00000580127 C1QTNF9P0C862 333 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 FAM200BP0CF97 657 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 GNSP15586 552 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 CASP4P49662 377 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 MAP3K7CLP57077 242 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 ZNF33AQ06730 810 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 SCARA5Q6ZMJ2 495 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 FRMD1Q8N878 549 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 CCDC150Q8NCX0 1101 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 SLC2A14Q8TDB8 520 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 TMC2Q8TDI7 906 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 KLF16Q9BXK1 252 aaPredicted RBP18.9■□□□□ 0.62
MKS1-209ENST00000580127 CSNK1G1Q9HCP0 422 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 ZDHHC4Q9NPG8 344 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 SUSD2Q9UGT4 822 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 ZMIZ1Q9ULJ6 1067 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 ZNF510Q9Y2H8 683 aa18.9■□□□□ 0.62
MKS1-209ENST00000580127 LRRIQ3A6PVS8 624 aaPredicted RBP18.89■□□□□ 0.61
MKS1-209ENST00000580127 NEDD8-MDP1E9PL57 170 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 GFRA2O00451 464 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 PDXKO00764 312 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 CACNG3O60359 315 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 TYRP14679 529 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 GABRG2P18507 467 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 PSEN1P49768 467 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 NDST1P52848 882 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 CUL4BQ13620 913 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 PEAR1Q5VY43 1037 aaPredicted RBP18.89■□□□□ 0.61
MKS1-209ENST00000580127 KLHDC10Q6PID8 442 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 FOXJ1Q92949 421 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 CCDC47Q96A33 483 aaKnown RBP18.89■□□□□ 0.61
MKS1-209ENST00000580127 CDK5RAP1Q96SZ6 601 aaKnown RBP18.89■□□□□ 0.61
MKS1-209ENST00000580127 SMOQ99835 787 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 DMAC2Q9NW81 257 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 CALCOCO1Q9P1Z2 691 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 DNMT3LQ9UJW3 386 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 SCML2Q9UQR0 700 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 PCDHA5Q9Y5H7 936 aa18.89■□□□□ 0.61
MKS1-209ENST00000580127 A0A1W2PQD8 194 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 SLFN14P0C7P3 912 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 WASP42768 502 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 DGKGP49619 791 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 SIM1P81133 766 aaPredicted RBP18.88■□□□□ 0.61
MKS1-209ENST00000580127 SEMA3BQ13214 749 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 ZACNQ401N2 412 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 TPGS1Q6ZTW0 290 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 RGL4Q8IZJ4 473 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
MKS1-209ENST00000580127 HNRNPABQ99729 332 aaKnown RBP18.88■□□□□ 0.61
MKS1-209ENST00000580127 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
MKS1-209ENST00000580127 CYLDQ9NQC7 956 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 NEUROG3Q9Y4Z2 214 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 PCDHB9Q9Y5E1 797 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 FAM208BQ5VWN6 2430 aa18.88■□□□□ 0.61
MKS1-209ENST00000580127 ARHGAP33O14559 1287 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 NPC1O15118 1278 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CACNA1GO43497 2377 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CALUO43852 315 aaPredicted RBP18.87■□□□□ 0.61
MKS1-209ENST00000580127 MYL1P05976 194 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CHRM1P11229 460 aaPredicted RBP18.87■□□□□ 0.61
MKS1-209ENST00000580127 RALAP11233 206 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CCDC130P13994 396 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 CASP1P29466 404 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 ZNF132P52740 706 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 SLC14A1Q13336 389 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 STARD3Q14849 445 aa18.87■□□□□ 0.61
MKS1-209ENST00000580127 WDR45BQ5MNZ6 344 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms