RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GRIA2P42262 883 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TGFB2P61812 414 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ZNF200P98182 395 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ROR1Q01973 937 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ROR2Q01974 943 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 GCNT1Q02742 428 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RSPH3Q86UC2 560 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TRIM4Q9C037 500 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 NOD1Q9Y239 953 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 GON4LQ3T8J9 2241 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 A0A0B4J269 797 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 CLDN5O00501 218 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MAGEB2O15479 319 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MTA2O94776 668 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MICAL2O94851 1124 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MYL2P10916 166 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PYGBP11216 843 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 P4HA1P13674 534 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 NCF2P19878 526 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MUTP22033 750 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 IL1R2P27930 398 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 VHLP40337 213 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PGGT1BP53609 377 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 INHBCP55103 352 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RTP1P59025 263 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ZNF252P-AS1Q0IIN9 211 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 STAT4Q14765 748 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 TFDP3Q5H9I0 405 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 NXNQ6DKJ4 435 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 IZUMO2Q6UXV1 221 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RAPH1Q70E73 1250 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ENOSF1Q7L5Y1 443 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 SAMD3Q8N6K7 520 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 CFAP61Q8NHU2 1237 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 CLEC4CQ8WTT0 213 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 FAM172AQ8WUF8 416 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 INPP5DQ92835 1189 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 FAM81BQ96LP2 452 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 FGD4Q96M96 766 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 BTBD10Q9BSF8 475 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 CDT1Q9H211 546 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 LRRC4Q9HBW1 653 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 GPRC5DQ9NZD1 345 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ARHGAP28Q9P2N2 729 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 TRIM49D1C9J1S8 452 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 HMGCRP04035 888 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 TPH1P17752 444 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RBL1P28749 1068 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 GSTT1P30711 240 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PHBP35232 272 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 SLC1A1P43005 524 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 EPHB1P54762 984 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ALDH18A1P54886 795 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 LPCAT4Q643R3 524 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 METTL7BQ6UX53 244 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 DENND5BQ6ZUT9 1274 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PDCD7Q8N8D1 485 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 B4GALNT2Q8NHY0 566 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 EDEM1Q92611 657 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 EZH1Q92800 747 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 GATA6Q92908 595 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 COPEO14579 308 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 UGT1A9O60656 530 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 TROVE2P10155 538 aaKnown RBP eCLIP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 OSBPP22059 807 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RASSF2P50749 326 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 YWHAEP62258 255 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 MCL1Q07820 350 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PTK7Q13308 1070 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 OLIG2Q13516 323 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ZRSR2Q15696 482 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 IER5Q5VY09 327 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 UNC5BQ8IZJ1 945 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ZCCHC9Q8N567 271 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PYDC1Q8WXC3 89 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 SLCO2A1Q92959 643 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 SLITRK1Q96PX8 696 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 PANX3Q96QZ0 392 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 EBF3Q9H4W6 596 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 UGT1A7Q9HAW7 530 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 UGT1A10Q9HAW8 530 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 UGT1A8Q9HAW9 530 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 DPP3Q9NY33 737 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
RPAIN-215ENST00000575112 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 ATP8B3O60423 1300 aa8.85□□□□□ -0.99
RPAIN-215ENST00000575112 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 H3BRB1 525 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 C2CD2LO14523 706 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 TXNDC9O14530 226 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SCAMP3O14828 347 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MED7O43513 233 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms