RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 RNF169Q8NCN4 708 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 ATL2Q8NHH9 583 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 TEKT4Q8WW24 435 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 RXFP2Q8WXD0 754 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 IRF2BPLQ9H1B7 796 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 NSUN3Q9H649 340 aaKnown RBP15.28■□□□□ 0.04
COMMD4-221ENST00000567935 TMEM161AQ9NX61 479 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 hCG_1818297A0A087WSY0 165 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 LRRD1A4D1F6 860 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 CASTOR2A6NHX0 329 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 ZNF487B1APH4 448 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-221ENST00000567935 HOXA2O43364 376 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 B3GAT3O94766 335 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 FBXO21O94952 628 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 POMCP01189 267 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 GJC1P36383 396 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 CDKN2BP42772 138 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 MRPS25P82663 173 aaKnown RBP15.27■□□□□ 0.04
COMMD4-221ENST00000567935 MTMR3Q13615 1198 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 MBTPS1Q14703 1052 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 HSP90B2PQ58FF3 399 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 NOMO2Q5JPE7 1267 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 THEM5Q8N1Q8 247 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 EMC1Q8N766 993 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 CMASQ8NFW8 434 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-221ENST00000567935 SEPT8Q92599 483 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 ACBD6Q9BR61 282 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 OSBPL7Q9BZF2 842 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 USP18Q9UMW8 372 aa15.27■□□□□ 0.04
COMMD4-221ENST00000567935 FAM186AA6NE01 2351 aa15.27■□□□□ 0.03
COMMD4-221ENST00000567935 RIF1Q5UIP0 2472 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 TCRBV7S2A1N4TA0A589 114 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 ZSCAN5CA6NGD5 496 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 DAPK3O43293 454 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 PRPSAP2O60256 369 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 NBNO60934 754 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 HSF2BPO75031 334 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MIPP30301 263 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 AFF1P51825 1210 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 DSC1Q08554 894 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 PTK6Q13882 451 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 PDK2Q15119 407 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 PLEKHG4Q58EX7 1191 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 TTC27Q6P3X3 843 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MAP7D3Q8IWC1 876 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 GSPT2Q8IYD1 628 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 BBOF1Q8ND07 529 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 TSPYL1Q9H0U9 437 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 LRRC4Q9HBW1 653 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 MTRF1LQ9UGC7 380 aaKnown RBP15.26■□□□□ 0.03
COMMD4-221ENST00000567935 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 INPP5FQ9Y2H2 1132 aa15.26■□□□□ 0.03
COMMD4-221ENST00000567935 ABHD14A-ACY1A0A1B0GW23 586 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 H3BNC9 293 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TULP2O00295 520 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 CXCL10P02778 98 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 KDELR1P24390 212 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 ECHS1P30084 290 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 FLT3P36888 993 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 CAV1Q03135 178 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 SMAD4Q13485 552 aaKnown RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 GPM6BQ13491 265 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TFDP2Q14188 446 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 PPP1R7Q15435 360 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 CTC1Q2NKJ3 1217 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 DAB2IPQ5VWQ8 1189 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 BBS12Q6ZW61 710 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 STRADAQ7RTN6 431 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 RTN4RL1Q86UN2 441 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 PIGZQ86VD9 579 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 ARFGAP1Q8N6T3 406 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 CCDC89Q8N998 374 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 C3orf58Q8NDZ4 430 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 NKD2Q969F2 451 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 ASIC4Q96FT7 647 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 SMARCD1Q96GM5 515 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TRIM51Q9BSJ1 452 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TRIM62Q9BVG3 475 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 PRDM16Q9HAZ2 1276 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 PNPLA8Q9NP80 782 aa15.25■□□□□ 0.03
COMMD4-221ENST00000567935 WHRNQ9P202 907 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms