RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
CSHL1-208ENST00000558609 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
CSHL1-208ENST00000558609 NCDNQ9UBB6 729 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 DNMT3LQ9UJW3 386 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 NAGPAQ9UK23 515 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 RAB23Q9ULC3 237 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 MYOFQ9NZM1 2061 aa16.31■□□□□ 0.2
CSHL1-208ENST00000558609 HOXC11O43248 304 aaPredicted RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 IRF1P10914 325 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 RALAP11233 206 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 VDRP11473 427 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 PLA2G4AP47712 749 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 SLC6A11P48066 632 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 GAD2Q05329 585 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 SIM2Q14190 667 aaPredicted RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 LAIR1Q6GTX8 287 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 ACDQ96AP0 544 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 CDK5RAP1Q96SZ6 601 aaKnown RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 PNKPQ96T60 521 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 SPHK2Q9NRA0 654 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
CSHL1-208ENST00000558609 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 CEP250Q9BV73 2442 aa16.3■□□□□ 0.2
CSHL1-208ENST00000558609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 APODP05090 189 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 PAEPP09466 180 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 CD19P15391 556 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 BCAT1P54687 386 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 PDE4CQ08493 712 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 SRSF5Q13243 272 aaKnown RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 GOLGA7BQ2TAP0 167 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 C10orf120Q5SQS8 335 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 PM20D1Q6GTS8 502 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 TMEM25Q86YD3 366 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 ETFBKMTQ8IXQ9 262 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 ARHGAP18Q8N392 663 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 NUDT5Q9UKK9 219 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSHL1-208ENST00000558609 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
CSHL1-208ENST00000558609 O00370 1275 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 MDM4O15151 490 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 KAT7O95251 611 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 AFPP02771 609 aaKnown RBP16.28■□□□□ 0.2
CSHL1-208ENST00000558609 GRIA2P42262 883 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 TNFRSF4P43489 277 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
CSHL1-208ENST00000558609 TKTL1P51854 596 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 GCNT1Q02742 428 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 MESP2Q0VG99 397 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 DMC1Q14565 340 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 PKDCCQ504Y2 493 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 BTBD8Q5XKL5 378 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 LCLAT1Q6UWP7 414 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 PRR23BQ6ZRT6 265 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 KAT5Q92993 513 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 EBF1Q9UH73 591 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 GMEB2Q9UKD1 530 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 EPG5Q9HCE0 2579 aa16.28■□□□□ 0.2
CSHL1-208ENST00000558609 ZFHX4Q86UP3 3567 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
CSHL1-208ENST00000558609 TULP2O00295 520 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 KRT37O76014 449 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 STC2O76061 302 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 APBB3O95704 486 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 ZBED1O96006 694 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 RETP07949 1114 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 SETSIPP0DME0 302 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.2
CSHL1-208ENST00000558609 TGM1P22735 817 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 SEC13P55735 322 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 YWHAGP61981 247 aaKnown RBP eCLIP16.27■□□□□ 0.2
CSHL1-208ENST00000558609 COG7P83436 770 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 CNGA2Q16280 664 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 LPAL2Q16609 132 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 ANO4Q32M45 955 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.2
CSHL1-208ENST00000558609 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
CSHL1-208ENST00000558609 C2orf27AQ580R0 203 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 Q6ZNB5 142 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 CLEC17AQ6ZS10 378 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms