RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 RLN3Q8WXF3 142 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 PAGE5Q96GU1 130 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 SLITRK1Q96PX8 696 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 PNKPQ96T60 521 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 DUSP9Q99956 384 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 CSNK1G1Q9HCP0 422 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 CD248Q9HCU0 757 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 OSER1Q9NX31 292 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 GMIPQ9P107 970 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 WASF3Q9UPY6 502 aa11.84□□□□□ -0.51
HNRNPC-231ENST00000557336 C4orf47A7E2U8 309 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 HOXC11O43248 304 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 KLF8O95600 359 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 TBX18O95935 607 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 ASS1P00966 412 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 ADH5P11766 374 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 CCDC130P13994 396 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 GBP1P32455 592 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 P2RY2P41231 377 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 GRIA2P42262 883 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 ME1P48163 572 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 NDST1P52848 882 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 SHC2P98077 582 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 SPOPLQ6IQ16 392 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 SV2AQ7L0J3 742 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 GPRIN1Q7Z2K8 1008 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 MIB1Q86YT6 1006 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 DMAP1Q9NPF5 467 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 ARHGEF4Q9NR80 690 aa11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 MYO18AQ92614 2054 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-231ENST00000557336 PHACTR2O75167 634 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 TULP3O75386 442 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 AP1G2O75843 785 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 ADH1CP00326 375 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 PTGER3P43115 390 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 TNFRSF4P43489 277 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 ASPAP45381 313 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 TUBP50607 506 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 AP3M2P53677 418 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 IRX4P78413 519 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 KDSRQ06136 332 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 BIRC3Q13489 604 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 ZNF667Q5HYK9 610 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 SLC2A14Q8TDB8 520 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 KLF16Q9BXK1 252 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 NMUR1Q9HB89 426 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 APOBEC3GQ9HC16 384 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 TMEM74BQ9NUR3 256 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 HPSEQ9Y251 543 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 ZDHHC9Q9Y397 364 aa11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 ASCC3Q8N3C0 2202 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-231ENST00000557336 NUP205Q92621 2012 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 A0A1B0GVL5 298 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 PDXKO00764 312 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 NR3C1P04150 777 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 APODP05090 189 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 MCCD1P59942 119 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 ST3GAL2Q16842 350 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 PSAPL1Q6NUJ1 521 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 HTR3DQ70Z44 454 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 WHAMMQ8TF30 809 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 OTUB2Q96DC9 234 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 SMARCD1Q96GM5 515 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 MED10Q9BTT4 135 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.523e-7■■■■■ 34.8
HNRNPC-231ENST00000557336 SPHK2Q9NRA0 654 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 FAM49BQ9NUQ9 324 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 COMMD8Q9NX08 183 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 FAM13BQ9NYF5 915 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 ANGPTL2Q9UKU9 493 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 THADAQ6YHU6 1953 aa11.81□□□□□ -0.52
HNRNPC-231ENST00000557336 LAMA5O15230 3695 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms