RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DYDC2Q96IM9 177 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ZMAT2Q96NC0 199 aaKnown RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 RGL1Q9NZL6 768 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 CNTN3Q9P232 1028 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 TBC1D14Q9P2M4 693 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 DDX25Q9UHL0 483 aaKnown RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 DSEQ9UL01 958 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 TNFSF13BQ9Y275 285 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 MAP4K5Q9Y4K4 846 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 SETD2Q9BYW2 2564 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 COL5A1P20908 1838 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 MYH6P13533 1939 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 CABIN1Q9Y6J0 2220 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 NUP205Q92621 2012 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ESPNB1AK53 854 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 LEFTY2O00292 366 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ZBTB43O43298 467 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 EDIL3O43854 480 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 USP12O75317 370 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 SLITRK3O94933 977 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 TDP2O95551 362 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ACADMP11310 421 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ODC1P11926 461 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 CTSKP43235 329 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 NAMPTP43490 491 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 AARSP49588 968 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 OSTNP61366 133 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 RPL10AP62906 217 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ATP2C1P98194 919 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 KDSRQ06136 332 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 MESP2Q0VG99 397 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ST3GAL1Q11201 340 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 NCOA4Q13772 614 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ZSCAN23Q3MJ62 389 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 INTS6LQ5JSJ4 861 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 APOA5Q6Q788 366 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 FILIP1Q7Z7B0 1213 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ATCAYQ86WG3 371 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 TICAM1Q8IUC6 712 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 EID2Q8N6I1 236 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 LRRC15Q8TF66 581 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 SNX19Q92543 992 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 OTUB2Q96DC9 234 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 SGF29Q96ES7 293 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 TRMT2BQ96GJ1 504 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 MYRFLQ96LU7 910 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 DEPDC7Q96QD5 511 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ELF4Q99607 663 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 GABRG3Q99928 467 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 TCHPQ9BT92 498 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ACE2Q9BYF1 805 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ZCWPW1Q9H0M4 648 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 VRTNQ9H8Y1 702 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 TM9SF3Q9HD45 589 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 GEMIN8Q9NWZ8 242 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 GCNT4Q9P109 453 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 USP36Q9P275 1121 aaKnown RBP6.17□□□□□ -1.42
ATXN3-245ENST00000556958 VAV3Q9UKW4 847 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 ATG2BQ96BY7 2078 aa6.17□□□□□ -1.42
ATXN3-245ENST00000556958 VPS37CA5D8V6 355 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 GOLGA8AA7E2F4 631 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 GOLGA8BA8MQT2 603 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 K7ERI5 159 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 CBX4O00257 560 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 USO1O60763 962 aaKnown RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 AGFG2O95081 481 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 BAG4O95429 457 aaKnown RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 FAM87AP0C7U9 286 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 MCF2P10911 925 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 CYP3A5P20815 502 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 LRPAP1P30533 357 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 CASRP41180 1078 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ARRB1P49407 418 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 RARRES1P49788 294 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 TPMTP51580 245 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 IL9RQ01113 521 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 E2F5Q15329 346 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ZC2HC1CQ53FD0 456 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 IGF2-ASQ6U949 168 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 DDX42Q86XP3 938 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 GATAD2AQ86YP4 633 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ZNF564Q8TBZ8 553 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 SCFD1Q8WVM8 642 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 PRCCQ92733 491 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 EXTL1Q92935 676 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 GRAMD1AQ96CP6 724 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 SIPA1Q96FS4 1042 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 IFT74Q96LB3 600 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 SENP8Q96LD8 212 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms