RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 COL5A1P20908 1838 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-221ENST00000552022 GFRA2O00451 464 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 JUPP14923 745 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 GRK6P43250 576 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 KCNC4Q03721 635 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 FUT11Q495W5 492 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 C6orf118Q5T5N4 469 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 TDRD10Q5VZ19 366 aaKnown RBP13.51□□□□□ -0.25
CACNB3-221ENST00000552022 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
CACNB3-221ENST00000552022 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 PCED1BQ96HM7 432 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 SLITRK1Q96PX8 696 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 PARVGQ9HBI0 331 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 SIX4Q9UIU6 781 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 SH3BP1Q9Y3L3 701 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 PIEZO2Q9H5I5 2752 aa13.51□□□□□ -0.25
CACNB3-221ENST00000552022 ERVH48-1M5A8F1 160 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 LAD1O00515 517 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 CACNG3O60359 315 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 FAM13AO94988 1023 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 PDGFRBP09619 1106 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 CISD3P0C7P0 127 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 CXADRP78310 365 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 TLE3Q04726 772 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 TARDBPQ13148 414 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 RTP5Q14D33 572 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 SF3A1Q15459 793 aaKnown RBP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 TMEM119Q4V9L6 283 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 GPBP1Q86WP2 473 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 FAM181AQ8N9Y4 354 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 MYCBPAPQ8TBZ2 947 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 BAP1Q92560 729 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 HNRNPABQ99729 332 aaKnown RBP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 SEMA4CQ9C0C4 833 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 CHORDC1Q9UHD1 332 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-221ENST00000552022 ANKRD6Q9Y2G4 727 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 PTPN13Q12923 2485 aa13.5□□□□□ -0.25
CACNB3-221ENST00000552022 NEDD8-MDP1E9PL57 170 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 GREM1O60565 184 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 KRT19P08727 400 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 TYRP14679 529 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 OXTRP30559 389 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 AFF3P51826 1226 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 RBP5P82980 135 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 SRSF1Q07955 248 aaKnown RBP eCLIP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 MAPRE1Q15691 268 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 TAF1BQ53T94 588 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 KCNT1Q5JUK3 1230 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 DPH6Q7L8W6 267 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 FGF11Q92914 225 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 XPO6Q96QU8 1125 aaKnown RBP13.49□□□□□ -0.25
CACNB3-221ENST00000552022 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 NUP58Q9BVL2 599 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 NRSN2Q9GZP1 204 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 CCSER2Q9H7U1 834 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 NME7Q9Y5B8 376 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
CACNB3-221ENST00000552022 B8ZZF3 427 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 H0Y8X5 98 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 IRF1P10914 325 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 HNF1BP35680 557 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 MDH1BQ5I0G3 518 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 HECTD3Q5T447 861 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 SNX30Q5VWJ9 437 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 TPGS1Q6ZTW0 290 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 ENGASEQ8NFI3 743 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 WBP1Q96G27 269 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 BBS2Q9BXC9 721 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 ST6GALNAC4Q9H4F1 302 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 ZHX3Q9H4I2 956 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
CACNB3-221ENST00000552022 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
CACNB3-221ENST00000552022 CBX4O00257 560 aa13.47□□□□□ -0.25
CACNB3-221ENST00000552022 WISP1O95388 367 aa13.47□□□□□ -0.25
CACNB3-221ENST00000552022 WARSP23381 471 aaKnown RBP13.47□□□□□ -0.25
CACNB3-221ENST00000552022 YWHAQP27348 245 aa13.47□□□□□ -0.25
CACNB3-221ENST00000552022 ABCD1P33897 745 aa13.47□□□□□ -0.25
CACNB3-221ENST00000552022 DGKGP49619 791 aa13.47□□□□□ -0.25
CACNB3-221ENST00000552022 CCT8P50990 548 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms