RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CD101Q93033 1021 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 ULBP1Q9BZM6 244 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-221ENST00000550100 SIX2Q9NPC8 291 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 UBE2TQ9NPD8 197 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-221ENST00000550100 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 CNTN6Q9UQ52 1028 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 KIAA1549LQ6ZVL6 1849 aa12.42□□□□□ -0.42
LETMD1-221ENST00000550100 BECN2A8MW95 431 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 XPO1O14980 1071 aaKnown RBP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 HRO43593 1189 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 PXNP49023 591 aaPredicted RBP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 RGS7P49802 495 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 LRRC32Q14392 662 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 C10orf120Q5SQS8 335 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 EMC10Q5UCC4 262 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 HEATR6Q6AI08 1181 aaKnown RBP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 DCLK2Q8N568 766 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 CLEC4CQ8WTT0 213 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 SLC35F5Q8WV83 523 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 SAMSN1Q9NSI8 373 aaKnown RBP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 HCN2Q9UL51 889 aa12.41□□□□□ -0.42
LETMD1-221ENST00000550100 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.41□□□□□ -0.42
LETMD1-221ENST00000550100 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 E7ENQ6 273 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 NFATC1O95644 943 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 PAEPP09466 180 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.42
LETMD1-221ENST00000550100 PON1P27169 355 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 ATP5C1P36542 298 aaKnown RBP12.4□□□□□ -0.42
LETMD1-221ENST00000550100 CCR3P51677 355 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 GCNT1Q02742 428 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 CNGA2Q16280 664 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 DENND1BQ6P3S1 775 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 TRIM65Q6PJ69 517 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 Q6ZNB5 142 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 ZNF276Q8N554 614 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 KIAA1958Q8N8K9 716 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 NAT16Q8N8M0 369 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
LETMD1-221ENST00000550100 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 CYTH4Q9UIA0 394 aa12.4□□□□□ -0.42
LETMD1-221ENST00000550100 STC2O76061 302 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 PAPSS2O95340 614 aaPredicted RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 FGFR1OPO95684 399 aaKnown RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 ZBED1O96006 694 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 LMNAP02545 664 aaKnown RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 HMBSP08397 361 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 DRD1P21728 446 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 PLA2G4AP47712 749 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 BCAT1P54687 386 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 SEC13P55735 322 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 YWHAGP61981 247 aaKnown RBP eCLIP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 YWHAEP62258 255 aaKnown RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 ADIGQ0VDE8 80 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 BST2Q10589 180 aaKnown RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 KCNMA1Q12791 1236 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 EFEMP1Q12805 493 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.43
LETMD1-221ENST00000550100 MIB1Q86YT6 1006 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 SYNPOQ8N3V7 929 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 RPLP0P6Q8NHW5 317 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 EDEM1Q92611 657 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 IER2Q9BTL4 223 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 NACA2Q9H009 215 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 THAP9Q9H5L6 903 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 CLIC5Q9NZA1 410 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 KIAA1257Q9ULG3 409 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 SH3BP1Q9Y3L3 701 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.43
LETMD1-221ENST00000550100 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 DNAH14Q0VDD8 3507 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-221ENST00000550100 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-221ENST00000550100 ADH5P11766 374 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 LCP1P13796 627 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
LETMD1-221ENST00000550100 ERCC5P28715 1186 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-221ENST00000550100 MTIF2P46199 727 aaKnown RBP12.39□□□□□ -0.43
LETMD1-221ENST00000550100 NR1H3Q13133 447 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 LPAL2Q16609 132 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 USP33Q8TEY7 942 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 SPHK2Q9NRA0 654 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 TBC1D14Q9P2M4 693 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
LETMD1-221ENST00000550100 CEP250Q9BV73 2442 aa12.38□□□□□ -0.43
LETMD1-221ENST00000550100 A0A0A0MRY4 1105 aa12.38□□□□□ -0.43
LETMD1-221ENST00000550100 M0QYV0 167 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms