RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PSRC1Q6PGN9 363 aaPredicted RBP9.2□□□□□ -0.94
VPS13D-212ENST00000543766 CRELD2Q6UXH1 353 aaPredicted RBP9.2□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF677Q86XU0 584 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 PNPT1Q8TCS8 783 aaKnown RBP9.2□□□□□ -0.94
VPS13D-212ENST00000543766 EGLN2Q96KS0 407 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 CEP19Q96LK0 163 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 GCOM2Q9BZD3 368 aaPredicted RBP9.2□□□□□ -0.94
VPS13D-212ENST00000543766 FAIMQ9NVQ4 179 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 SNTG2Q9NY99 539 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 IL37Q9NZH6 218 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 COQ6Q9Y2Z9 468 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 STARD13Q9Y3M8 1113 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 PCDHGA11Q9Y5H2 935 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 KIF1AQ12756 1690 aa9.2□□□□□ -0.94
VPS13D-212ENST00000543766 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TBX18O95935 607 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ICAM2P13598 275 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ANXA8P13928 327 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MAP4P27816 1152 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 PBX1P40424 430 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 PRCPP42785 496 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ACTR3P61158 418 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MYL5Q02045 173 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TIGD2Q4W5G0 525 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GRTP1Q5TC63 336 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ANXA8L1Q5VT79 327 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 LDHAL6AQ6ZMR3 332 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF473Q8WTR7 871 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 PRCCQ92733 491 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 PPP1R14DQ9NXH3 145 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GPRC5BQ9NZH0 403 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 NWD2Q9ULI1 1742 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GCATO75600 419 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SNRPA1P09661 255 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TNNI3P19429 210 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GNA11P29992 359 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 RABIFP47224 123 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SEC24CP53992 1094 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ANKS6Q68DC2 871 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 FCRLBQ6BAA4 426 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GPR139Q6DWJ6 353 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MZT2AQ6P582 158 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 HCAR2Q8TDS4 363 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 HEXDCQ8WVB3 486 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 DGCR14Q96DF8 476 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 FAM192AQ9GZU8 254 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SEPT3Q9UH03 358 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 RBM8AQ9Y5S9 174 aaKnown RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TAF6LQ9Y6J9 622 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SESN1Q9Y6P5 492 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SH3TC1Q8TE82 1336 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 C4AP0C0L4 1744 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 DNM1LO00429 736 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ANGPT2O15123 496 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ADAM23O75077 832 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 POLBP06746 335 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 GHRP10912 638 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TNNI1P19237 187 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 ALDH4A1P30038 563 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 NPEPPSP55786 919 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TGFB2P61812 414 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 AKIRIN2Q53H80 203 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 FAM205BPQ63HN1 556 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 C1orf94Q6P1W5 598 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 KLHL35Q6PF15 583 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 LUZP2Q86TE4 346 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SLC35F6Q8N357 371 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 FAR2Q96K12 515 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 TMEM68Q96MH6 324 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 NUP88Q99567 741 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-212ENST00000543766 EDEM2Q9BV94 578 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 MYLK2Q9H1R3 596 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 C19orf44Q9H6X5 657 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 FLT4P35916 1363 aa9.19□□□□□ -0.94
VPS13D-212ENST00000543766 PNMA6FA0A0J9YX94 578 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PPEF2O14830 753 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 USP12O75317 370 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 BEST1O76090 585 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CTDNEP1O95476 244 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 GSTM1P09488 218 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NR2C1P13056 603 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ITGA2P17301 1181 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PSMA5P28066 241 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PPP3CCP48454 512 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 HNMTP50135 292 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 AIF1P55008 147 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 FCHO2Q0JRZ9 810 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms